Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00015 ATGAAAATGGGTGGATGGGTGAAGGGTAAAGTGGTTGGAAGTGGATCTTTTGGCAGTGTCCATTTAGCAATAAACAAATCCAACGGTGGACTTTTCGTTGTGAAATCAGCAAATTCAGAGGCAGGACGTCATGCTCTTCATAACGAGTTCAATATCCTTAATACTTTAAATTATTCTCCCTATATTGTCCAATGTTTAGGGACAGAGTACCAACACCAAGGTGCTATCAACAACGTTTTCATGGAGTATATGTCAGGTGGTAGTTTGGCTGACGTGGCACACAACTTTGGCGGTTCATTAGATGAACAACTTGTACGTTTGTATACTAAGCATATCCTCCTTGGATTAAATCATCTTCATCAACATGGAATTGTTCATTGTGATCTTAAGTGCAAAAATGTTCTTTTGGCCTCATCTGGGAACGTCAAACTGGCAGATTTTGGTTGTGCTAGAAGGATtaaatcatcgtcgtcgtcgtcgtcatcatcaTGTTGTGGCACTCCTCTATGGATGGCTCCCGAGGTGTTATTATTGCACAACAATACTAATGAGAAGCTGGATTTGGATCTTGCAGCAGCAGATATATGGTCTTTGGGATGTACTGTTATTGAAATGGCTACTGGTAGACCTCCTTGGATTGATCATCTTCATGACTCTTCTACTTCAAATCCAATGGCTGCTTTGTTTAAGATTGCCCGTGGTAATGCCATACCTCAATTTCCACTTCATTTCTCTAAGGAGGGTATTGATTTCTTGAGCAGGTGTTTGGAGAGAGATCCCAATAAGAGGTCCACTGCTCATGACTTACTTTCCCATCCGTTTATTAATCTTTCAACTCATCACAAACACTGCTCTGCTTCCTCACCCGCAGCTGTTTTGGAGGTTCATAAATTTGAACATACTTATGATGATTTTGATGTTGATGTTGATTCAGATGATAAAATATTACAACAAAGTCCTACAAGGTTGAATCATTTCCACATCACAAATCAGTTTCTTTGCTCACAACTAGGAACAACAATATGGCAACTGGAAGATCGTGCATCAGGGAATCATTGGATCACTATTAGATCAAGGTCATAA 1083 0.3869 MKMGGWVKGKVVGSGSFGSVHLAINKSNGGLFVVKSANSEAGRHALHNEFNILNTLNYSPYIVQCLGTEYQHQGAINNVFMEYMSGGSLADVAHNFGGSLDEQLVRLYTKHILLGLNHLHQHGIVHCDLKCKNVLLASSGNVKLADFGCARRIKSSSSSSSSSCCGTPLWMAPEVLLLHNNTNEKLDLDLAAADIWSLGCTVIEMATGRPPWIDHLHDSSTSNPMAALFKIARGNAIPQFPLHFSKEGIDFLSRCLERDPNKRSTAHDLLSHPFINLSTHHKHCSASSPAAVLEVHKFEHTYDDFDVDVDSDDKILQQSPTRLNHFHITNQFLCSQLGTTIWQLEDRASGNHWITIRSRS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00015 360 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE 4 358 - -
Car01g00015 360 SMART serkin_6 6 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00015 360 Pfam Protein kinase domain 8 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00015 360 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 358 - -
Car01g00015 360 Gene3D Transferase(Phosphotransferase) domain 1 3 341 - -
Car01g00015 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Car01g00015 360 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Car01g00015 360 CDD STKc_MAPKKK 6 275 - -
Car01g00015 360 SUPERFAMILY Protein kinase-like (PK-like) 3 330 IPR011009 -
Car01g00015 360 ProSiteProfiles Protein kinase domain profile. 6 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00015 Car-Chr1 173404 174907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00015 6 294 MAP Kinase Kinase Kinase AT1G07150 40.203 5.20e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car01g00015 Pkinase 5.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00015 - K20716 mtr:MTR_2g005290 483.026