Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02448 atgattCAACCTCAAACCCATTTGAATGTAGCCGATAACAGCGGGGCCCGCAAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGCCGCTATGCTTATATTGGTGACGTTATTGTTGCTGTAATCAAGGAAGCAGTACCAAATACAACTTTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGCAAGAACGGTATGATAATACGATATGATGATAATGCTGCGGTTGTGATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCGATCGCCCGAGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCCGAGGTTCGTTTTTTAGATAATGAAGATATGATTTTAGGTTATGCTTTAGAAAGGATTCGACGTAGTTTTATACGTTATACTACCCGGAGGTCAAAATTGAAATCTACAGGGTCGGGTGATTTCTTGGTCCTCCGCCGGTA 497 0.3924 MIQPQTHLNVADNSGARKLMCIRIIGASNRRYAYIGDVIVAVIKEAVPNTTLERSEVIRAVIVRTCKELKRKNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPEVRFLDNEDMILGYALERIRRSFIRYTTRRSKLKSTGSGDFLVLRR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02448 165 ProSitePatterns Ribosomal protein L14 signature. 60 86 IPR019972 -
Bva14g02448 165 Pfam Ribosomal protein L14p/L23e 1 121 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bva14g02448 165 Gene3D Ribosomal protein L14 1 122 IPR036853 GO:0003735|GO:0005840|GO:0006412
Bva14g02448 165 SUPERFAMILY Ribosomal protein L14 1 121 IPR036853 GO:0003735|GO:0005840|GO:0006412
Bva14g02448 165 SMART Ribosomal_L14_2 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bva14g02448 165 PANTHER RIBOSOMAL PROTEIN L14B/L23E-RELATED 1 121 - -
Bva14g02448 165 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 121 IPR000218 GO:0003735|GO:0005840|GO:0006412
Bva14g02448 165 TIGRFAM rplN_bact: ribosomal protein uL14 1 121 IPR005745 GO:0003735|GO:0006412|GO:0015934
Bva14g02448 165 Hamap 50S ribosomal protein L14 [rplN]. 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02448 Bva-Chr14 21005219 21012707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02448 8 118 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.522 2.54e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02448 K02874 - tcc:9978155 228.024