Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02433 ATGAGCGGTTTAGGATGTGTGACGGGAGTCTCCAATTGGCAGCATCATCCAATCCTTGCTTCTTTCTGTTTTAGACCCGAGCAGTCAGTAACACGGTCGTCCTCGGCGTCGGCGTCGTGTTCTTCGTCgtcattttggtgtttcaacAACTTGTCGATATCTATCTCGTTCCCCCGTTGCACCAACAAAAATCAAGTTAAAAATGGCTGCTTATTTGCTCTGCCTGATAGTAATGGTGGTGAGCACTCCGAATCAGCATCATCTGAGGATGACAATGTTAAGGAAGAACAAGTTAAGGAACCAGCAGCAGTAGCAACACAAGCGCTAGAACTAGAATGGAACTTCCTCACTGGAAAGATTGGAGATTCAGGAATACTATCTTCATGCTTGATTGGTCTCCTCACCGGCGTTGCTGTCGTGCTCTTTAATAATCTAGTCCATGAAATTCGTGACTTTTGTTGGGATGGGATTCCCAATCGAGGCGCCTCGTGGTTGAGAGAAGAGCCCATTCAGGAAGTCTGGACAAGAGTGATCCTAGTGCCTGCTTTTGGTGGTGTGATTGTCGCTTTGCTGAACCTGTTTGCTTCTTCTATGCGTGTGGAACAAGATGATGGTCCGCTTCGCTCGCCTTCTAATTATCTCAAATCGGCTTCCCGCCCTTTCTTGAAGGCTTTGGCAGCTTCTGTTACCTTAGGCACAGGGAATTCCTTGGGGCCTGAGGGACCTAGCGTCGACATTGGTACCTCCATTGCCAAAGGTGTTGGTTCTTTGTTTGATAATAGTACCGGCAGAATGCTCTCCCTTGTCGCTGCGGGTTCTGCTGCTGGCATCTCCTCCGGTTTCAATGCTGCTGTTGCTGGTTGTTTTTTTGCTGTAGAGCAAGTTTTATGGTCATCATCTGCAGAAGCATCTTTGTCACTTACAAATACTACTTCTATGGTAATACTTAGTGCTGTCATAGGTTCCGTGGTTTCTGAAGCTGGTCTTGGCGCTGAACCAGCCTTTAGAGTTCCAGAATATGACTTTCGTTCACCTGGTGAGCTCCCGCTGTATTTATTGCTGGGTATTTTATGTGGCCTGGTGTCTTTGGGCCTATCTCGGTGTACTTCATATATGATGACAAATGTTGACAATTTTCACAAAGCCACCAGCATACCAAAAGCTTCATTCCCTGTATTGGGTGGCTTATCTGTCGGATTGATGGCATTGGCATATCCCGAAATTCTCTACTGGGGTTTTGAGAATGTTGACATTTTGCTAGAATCTCGGCCATTTGTGAATGGTCTCTCCACTGACCTATTGCTTCAGCTAATAGTGGTCAAGATAGTCGCAACTTCTTTATGTCGAGCTTCAGGGTTAGTTGGAGGGTATTATGCCCCATCCCTCTTTATAGGTGCAGCAACAGGGATGGCATATGGGAAACTCGTTGGCTTTGCTGTTGCTGAGTCAAGTCCAATTCATTTATCTGTATTGGAAGTGGCATCACCACAAGCATATGGCCTGGTTGGAATGGCGGCAACTCTTGCAGGGGTGTGTCAGACTAAGAGAGAGGAGGCAGAAATGCTCAAGCCAGAAACCTCAGATTCAACCATACTTCCTGAAATATGCTCTGGTGGTTCAACAGAGTTATTTACTGGTTATGCCCATGTAGAAATTGCACCTTCTTTGGGTAATATGAGTGAAGTTGAAAGTTCAATTTGTCAAAAGGATGATAATGTTGAAACTGCATCTTTAGAAGGGAGAACATTTGTTTCCGAAGCCATGAAGACAAGATATGTGACTGTCTCAATGTGCACATTGCTTACAGAAGTGTTAAATCTGATGCTTGCTGAGAAACAGTCTTGTGCTGTCATTGTTGATAATGATGATACTTTGATTGGTCTATTGACGCTTGGTGACATTCTAGAGTTTGGAAAATCTGCAAAAGCAAAAAGCAAAAACCCCAAGGAGCTTTTGGTCTCTGAATTATGCCTTTTACACGAGGGATTATGTAGAGTAGAATGGACTGCTACTCCTGATATGGTTCTTCTTTCTGCTCAAATGACTATGAAGGAACATGGACTTAATCAAGTTCCAGTTGTTAGAAGACTTCAAGAAAGAGCATATCCAGTTGGCATTTTAGACAGTGAAAGTATAAGTCTGACTTGCAGCGCTCTGGCAGCCAGAGAATGCCTCGGTTA 2180 0.4427 MSGLGCVTGVSNWQHHPILASFCFRPEQSVTRSSSASASCSSSSFWCFNNLSISISFPRCTNKNQVKNGCLFALPDSNGGEHSESASSEDDNVKEEQVKEPAAVATQALELEWNFLTGKIGDSGILSSCLIGLLTGVAVVLFNNLVHEIRDFCWDGIPNRGASWLREEPIQEVWTRVILVPAFGGVIVALLNLFASSMRVEQDDGPLRSPSNYLKSASRPFLKALAASVTLGTGNSLGPEGPSVDIGTSIAKGVGSLFDNSTGRMLSLVAAGSAAGISSGFNAAVAGCFFAVEQVLWSSSAEASLSLTNTTSMVILSAVIGSVVSEAGLGAEPAFRVPEYDFRSPGELPLYLLLGILCGLVSLGLSRCTSYMMTNVDNFHKATSIPKASFPVLGGLSVGLMALAYPEILYWGFENVDILLESRPFVNGLSTDLLLQLIVVKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKLVGFAVAESSPIHLSVLEVASPQAYGLVGMAATLAGVCQTKREEAEMLKPETSDSTILPEICSGGSTELFTGYAHVEIAPSLGNMSEVESSICQKDDNVETASLEGRTFVSEAMKTRYVTVSMCTLLTEVLNLMLAEKQSCAVIVDNDDTLIGLLTLGDILEFGKSAKAKSKNPKELLVSELCLLHEGLCRVEWTATPDMVLLSAQMTMKEHGLNQVPVVRRLQERAYPVGILDSESISLTCSALAARECLG 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02433 726 PRINTS Chloride channel signature 274 293 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g02433 726 PRINTS Chloride channel signature 497 513 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g02433 726 PRINTS Chloride channel signature 453 473 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g02433 726 PRINTS Chloride channel signature 223 242 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g02433 726 CDD CBS_pair_voltage-gated_CLC_euk_bac 588 713 - -
Bva14g02433 726 Pfam Voltage gated chloride channel 216 514 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g02433 726 PANTHER CHLORIDE CHANNEL PROTEIN CLC-E 110 721 - -
Bva14g02433 726 MobiDBLite consensus disorder prediction 80 99 - -
Bva14g02433 726 ProSiteProfiles CBS domain profile. 588 645 IPR000644 -
Bva14g02433 726 PANTHER CHLORIDE CHANNEL PROTEIN CLC-E 110 721 - -
Bva14g02433 726 MobiDBLite consensus disorder prediction 83 98 - -
Bva14g02433 726 Gene3D Clc chloride channel 119 515 - -
Bva14g02433 726 SUPERFAMILY CBS-domain pair 582 712 IPR046342 -
Bva14g02433 726 CDD Voltage_gated_ClC 132 514 - -
Bva14g02433 726 Pfam CBS domain 584 637 IPR000644 -
Bva14g02433 726 Gene3D - 568 714 IPR046342 -
Bva14g02433 726 SUPERFAMILY Clc chloride channel 125 514 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02433 Bva-Chr14 20782877 20790138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02433 82 316 Ion Channels AT3G27170 27.170 8.86e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02433 - - gmx:100812959 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02433 14 20782877 20790138 Bva14g02433 14 20782877 20790138 ECH