Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02429 ATGACCAACTTCGATTTGGATTTCCGATTCTCTGATTCTCCTGatgataacaataacaatagtGCATCAGTATCAAGTTTGATTGCTTCTTCTTGTTCGGAAGACAAGTTAGAGAAGGAGCATTGCCGGAAGAAGCGCAGCAAATTGATCAGAATTAGCGAGGACAgcgagaagaagaagaagaagaagggtttgaaagggaaaaaggcAGAGGACAGTGCACCTAAGATTACCCGGCCATGTAGCGAGTGCGGGAAGCAATTCTGGTCATGGAAGGCTCTGTTTGGGCACATGCGCTGCCATCCTGAACGTCAATGGCGTGGGATCAATCCACCCCCAAATTATCGACGGCAGCAATCGGACCAGAACAAGGACTTTATGACGGAAGAGGATCATGAGATTGCCGCTTGTCTGCTCTTGCTTGCCAATGGCGATGCTAATATCAGTAGAACCGCCGTTGACACCCAACAACAGAGTCATCTCTGGCAATTGGAATCTTTTGCTGGAGACGCTACCACCATCACCACCACGAGTAGGGAGGCAGACGGTGCGGCTTCATCGGGTCTGAATTGTCGTTTTGAGTGCTCGAGTTGTAACAAGGTATTTGGGTCACACCAGGCTCTGGGTGGCCATAGGGCTAGTCACAAGAATGTAAAGGGCTGTTTTGCTAATGCTATTACCAATACCAGAAGTGACGGTTCTGCTGATCAGGGTGTACTACAAGTTATTGCAGAGGACCACTACCTGCAGGATGAAACTCAAAATAACAACGACAACATCACTGTCACTAGTACAAGTACTAGTACTGGCTATGGTTACGATGACGATCATGTTCATGGTGGTATGCTTGTTATGGGATCAGTTTCAGGGCATAAGTGCAGCATATGTCTAAGGGTGTTTCCAAGTGGGCAAGCACTGGGAGGCCACAAGAGGTGCCATTGGGAGAAAGGGGACAATGACCTATCCGACGCCAGCATCGCCCCTTTTCCTCcatcatcaaattcaaatcaacCTTGTCTTGCTAATGCAGTCTTCGACTTGAACTTGCCTGCACATGATTCCTCCTCTCCGCATGCTTCCTACTCCTCACCTCCCACTCTGGATTTGAGGTTGGGACTCTA 1121 0.4541 MTNFDLDFRFSDSPDDNNNNSASVSSLIASSCSEDKLEKEHCRKKRSKLIRISEDSEKKKKKKGLKGKKAEDSAPKITRPCSECGKQFWSWKALFGHMRCHPERQWRGINPPPNYRRQQSDQNKDFMTEEDHEIAACLLLLANGDANISRTAVDTQQQSHLWQLESFAGDATTITTTSREADGAASSGLNCRFECSSCNKVFGSHQALGGHRASHKNVKGCFANAITNTRSDGSADQGVLQVIAEDHYLQDETQNNNDNITVTSTSTSTGYGYDDDHVHGGMLVMGSVSGHKCSICLRVFPSGQALGGHKRCHWEKGDNDLSDASIAPFPPSSNSNQPCLANAVFDLNLPAHDSSSPHASYSSPPTLDLRLGL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02429 373 MobiDBLite consensus disorder prediction 354 373 - -
Bva14g02429 373 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 7 373 - -
Bva14g02429 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 291 313 IPR013087 -
Bva14g02429 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 193 220 IPR013087 -
Bva14g02429 373 SMART c2h2final6 291 313 IPR013087 -
Bva14g02429 373 SMART c2h2final6 79 101 IPR013087 -
Bva14g02429 373 SMART c2h2final6 193 215 IPR013087 -
Bva14g02429 373 MobiDBLite consensus disorder prediction 1 77 - -
Bva14g02429 373 Pfam C2H2-type zinc finger 291 315 - -
Bva14g02429 373 Pfam C2H2-type zinc finger 192 216 - -
Bva14g02429 373 Pfam C2H2-type zinc finger 80 103 - -
Bva14g02429 373 ProSitePatterns Zinc finger C2H2 type domain signature. 195 215 IPR013087 -
Bva14g02429 373 MobiDBLite consensus disorder prediction 1 32 - -
Bva14g02429 373 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Bva14g02429 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Bva14g02429 373 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 7 373 - -
Bva14g02429 373 Gene3D Classic Zinc Finger 190 313 - -
Bva14g02429 373 MobiDBLite consensus disorder prediction 33 76 - -
Bva14g02429 373 SUPERFAMILY beta-beta-alpha zinc fingers 80 104 IPR036236 -
Bva14g02429 373 ProSitePatterns Zinc finger C2H2 type domain signature. 293 313 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02429 Bva-Chr14 20745880 20747305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02429 5 373 C2H2 Transcription Factor Family AT4G35280 41.099 4.68e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva14g02429 zf-C2H2_6 2.2e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02429 - - vvi:100245119 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02429 14 20745880 20747305 Bva14g02429 14 20745880 20747305 ECH