Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva14g02417 | ATGGCTAAGAAAGGTGTTGTTGTTCAAGTATTGTTGGTGGTAGCAATTACAGTCTGCTGTCTCGGGGCGACTGAAGCTCAATCCCAGTCTCTTGGGTTCGAATGCAGGTCAGACTCAGTCCAATGCCGTGCCCTCATCGATTACACTGCACCAAATAACACCAATTACAGAGCAATCCAGAAACTGTTCAACGTCAAACACCTCATCGACATTGTGGGTGCCAACAGCCTTCCGGCCAACACCAACGGTACCGATCCCGTCAACAAAGGCCGGACTATCCGAATCCCTTTCGGCTGCAAATGTCGGAACTCCACCGGATTGTCATCGAACCGCCGTCCCGTTTACACCGTGCAGAGCGGCGACACTCTCTCCCACATAGCCGAGGAAGTGTTCTCGCGACTGGTGACGTGGCAACAAATCCAAGCAGCCAATAATTTAACGGACCCAAACAAGATAGATGTGGGGCAGGAGTTCTGGATCCCATTGCCGTGTAGCTGCGATCAGGTGAACGACACGACGGTGGTACACTATGGACACGTGGTTGCTTCTGGCAGCACTGTCCAACAGATAGCTCAGCAGTACGGCACCACACAGGACACTCTCCTCAATCTCAATAATATGACTGATCCGAACAAACTTCAAGCCGGTCAAATTTTGGATGTTCCTCTCAaagCTTGTGGGTTGAATGTGAAAAATGAGTCATTGGATTTCCATTTGCTTGTTGCCGATACTACTGAGCTCTACACAGCAAATGGCTGCGTCAAGTGCAGATGTGACACTGCCAACAACTTAACAGTGCAATGCGAGCCATCGCAGGCTAAGCCGGCCAACTGGTCTACTTGCCCAACAATGCAATGTCAAACTTCTGATTCTGTCCAACTCTTCATCGGCAACGCCACAGATTCTTGTCCCCGAACAACGTGTGCCTATGCTGGTTATGCCGCCAACCAAACTATCTTCACTACTCTTGTCACTGATTCCACTTGTCCTGCATCGGGAGCATCCAGGATCACTTTGCCATCCTCCTTTCTCTCTATCTTCTTCGCCAGTATTGCCGTGTATCagtatttttcttgtcttttcgATTA | 1088 | 0.4881 | MAKKGVVVQVLLVVAITVCCLGATEAQSQSLGFECRSDSVQCRALIDYTAPNNTNYRAIQKLFNVKHLIDIVGANSLPANTNGTDPVNKGRTIRIPFGCKCRNSTGLSSNRRPVYTVQSGDTLSHIAEEVFSRLVTWQQIQAANNLTDPNKIDVGQEFWIPLPCSCDQVNDTTVVHYGHVVASGSTVQQIAQQYGTTQDTLLNLNNMTDPNKLQAGQILDVPLKACGLNVKNESLDFHLLVADTTELYTANGCVKCRCDTANNLTVQCEPSQAKPANWSTCPTMQCQTSDSVQLFIGNATDSCPRTTCAYAGYAANQTIFTTLVTDSTCPASGASRITLPSSFLSIFFASIAVYQYFSCLFD | 362 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva14g02417 | 362 | SUPERFAMILY | LysM domain | 114 | 162 | IPR036779 | - | |
Bva14g02417 | 362 | CDD | LysM | 114 | 160 | IPR018392 | - | |
Bva14g02417 | 362 | Gene3D | LysM domain | 109 | 168 | IPR036779 | - | |
Bva14g02417 | 362 | SUPERFAMILY | LysM domain | 178 | 222 | IPR036779 | - | |
Bva14g02417 | 362 | PANTHER | LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 | 24 | 330 | - | - | |
Bva14g02417 | 362 | SMART | LysM_2 | 114 | 161 | IPR018392 | - | |
Bva14g02417 | 362 | SMART | LysM_2 | 178 | 222 | IPR018392 | - | |
Bva14g02417 | 362 | CDD | LysM | 179 | 221 | IPR018392 | - | |
Bva14g02417 | 362 | ProSiteProfiles | LysM domain profile. | 113 | 160 | IPR018392 | - | |
Bva14g02417 | 362 | PANTHER | LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 | 24 | 330 | - | - | |
Bva14g02417 | 362 | Gene3D | LysM domain | 169 | 227 | IPR036779 | - | |
Bva14g02417 | 362 | ProSiteProfiles | LysM domain profile. | 177 | 221 | IPR018392 | - | |
Bva14g02417 | 362 | Pfam | LysM domain | 179 | 222 | IPR018392 | - | |
Bva14g02417 | 362 | Pfam | LysM domain | 115 | 161 | IPR018392 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva14g02417 | Bva-Chr14 | 20679761 | 20682705 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva14g02417 | 33 | 343 | LysM Receptor-like Protein (LYPs) Gene Family | AT2G17120 | 46.835 | 8.59e-88 | 267 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva14g02417 | - | - | twl:120001966 | 367.851 |