Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02401 ATGGCTGAAACTCACACTGGTCCAGCTCCCACACCCACTCTTAGCCCCAGGCCTTGTGATCATGCTAATAATGTTGAAGAAGCACATGGTTTCAGCTTAATGGTTCTTCTCTTAGCCATTGTATGTGCTTTTCTTTGTGCTCTTGGTCTCAACACTATGCTACAGTGTGTGTTTCAATGTGCTAATCGTGTTCTCACTGAACCTCTCCAATGGATTGCCTCTCGTCGCCTGAATTCTGGCctcaagaagaaagaaatggtgGCTTTGCCAACCTCAACTTATTACAGCACTCACTCTCCATCTTCGGCTTCAGCTTCTGCTTCTACTTCTGCAGCCTCTGCTTCTAATTGCGCAATTTGCTTAGCAGAGTTCTGTGATGGAGACATGATTAGGTTCCTCCCAAAATGCAATCACACTTTCCATGTCGCTTGCATCGATACATGGTTGCTTTCCCATTCTTCTTGCCCTACTTGCAGGCACCACCTCAAATCCATTAATCATTCCCTACACTCCTGCTTGCATATTGTCATACCCAATAATTA 542 0.4354 MAETHTGPAPTPTLSPRPCDHANNVEEAHGFSLMVLLLAIVCAFLCALGLNTMLQCVFQCANRVLTEPLQWIASRRLNSGLKKKEMVALPTSTYYSTHSPSSASASASTSAASASNCAICLAEFCDGDMIRFLPKCNHTFHVACIDTWLLSHSSCPTCRHHLKSINHSLHSCLHIVIPNN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02401 180 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Bva14g02401 180 CDD RING-H2_EL5_like 117 159 - -
Bva14g02401 180 PANTHER OS06G0666500 PROTEIN 21 168 - -
Bva14g02401 180 Pfam Ring finger domain 116 159 IPR001841 -
Bva14g02401 180 SUPERFAMILY RING/U-box 116 165 - -
Bva14g02401 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 165 IPR013083 -
Bva14g02401 180 SMART ring_2 117 158 IPR001841 -
Bva14g02401 180 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 21 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02401 Bva-Chr14 20578460 20579126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02401 15 162 C3H Transcription Factor Family AT3G10910 39.103 1.19e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02401 - - gmx:100779286 204.912