Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02379 ATGTCGACTGctacttcttcttctgcttctcACAGGGGAGAGGTTATCGTTAAAATCGACGGTAGTGACCCTGCAGCTGCACAGGGGAGTAAGATTTGGAGGGAATCCAGCATTGATTTCTGGAGCGATGGTAAGGATGATGACAAGAATGTGACTAGTGGTCGAGGTGTTAACGGTGATGAAGAGGGTTTTAAGTTCCGGCAGGGAACGGAGGATCCACCTTCGAAGCTGATTGGCAAGTTCTTGCACAAACAGAGAGCCTCCGGTGACATGTCACTGGATATGGATTTAGAGATGGACGAGCTCAAACACGACCGGAACTTACATCCGGTGGACGAGTCTCCGATGACGAATCGGATTTCGAAGGACCTCAAAGTGTCTTTTGAGGAACCGGAACTTGAGATAGCTCCGGATTCTGTAAGGCGAAGGCATAATAAGGAGGGGCAAGGTGACGAAGAATTTCCAAGACCTCCACTTCCGCCGCATCACGATGGTGGTGGAGATGGAGAGGTTGTAAGGTGTACATCGAACCGCTCCTTTGAAAGGAAGTCTGCCTTGTTAAAGGCCAAAACTAAGTCAAGATTATTGGACCCACCAGAGGAACCCGACCGGAGGTCTGGTCGGGTACTGAAATCGGGTCAATTATTCTCGGGGATGCTGGGGAAGAAAGgggatgatgaagaagatgatcCATTTTGGGAAGAGGATCTACCCGATGAGTTCAAAAAAACCCACTTTAGCTTATGGGTTTTGCTTGAGTGGTTGAGTTTGGTTTTGATAATTGGTGCTTTAGCATGCACACTTTCTATTCCCTATTTGAGGAATAAGAATCTCTGGAAGCTCAAGTTATGGAAATGGGAAGTGATGGTTCTGGTTCTAATTTGTGGGCGCTTAGTTTCTGATTGGGTAATCCGGATATTGGTATTCTTCATCGAAAGGAATTTCCTTTTGCGGAAGAGAGTACTCTATTTTGTCTATGGTATCAGAAAGGCAGTTCAAAAGACTCTGTGGTTGGGTTTTGTATTGATTGCTTggcatatattatttgataagaGAGTTGAGAGGGAGACTAGAAGTAACTTCCTTCAATATGTCACCAAGGTTTTGGTCTGTTTCTTGGTGGGTACTCTGGTATGGCTGGTGAAAACTCTTGTGGTTAAGGTGCTGGCTTCTTCTTTCCATGTAAGCACCTACTTTGATAGGATTCAGGAGTCACTCTTTAATCAATTCGTGATTGAAACACTCTCAGGTCCACCATTGATAGAAATTCAAAAGTCAGAGGAAGAGGAGGAAAGGCTTGCTGACGAGGTTCGGAAGTTGCAGAACGCTGGAGTTAATATACCCCCTGACCTTAAGGCAACTGCCTTCTCTTCAATTCAGAATAAAAAAACGATGAAGAGCGGAACGCTCCAAAAAAGTCCCAGGATCAGAAGTGGGAAGTTTTCTCGCCCACTTTCCAATAATGCAGACGATGGAATAACTATTGATCACTTGCATAAGCTGAACCCGAAAAATATCTCTGCCTGGAATATGAAAAGACTAATGAATATAGTCCGTTATGGGACTCTTTCTACACTGGATGAGCAGATACTCGATACTGCTCATGAAGATGAAAATGCCACACAGATTAGAAGTGAAAATGAGGCTAAAGCAgcagcaaagaaaatatttcaaaatgttGCTAGGCGAGGATCCAGaTATATATACCTGGAGGATTTGATGCGTTTTATGAGAGATGATGAAGCTTTAAAAGCAATGAATCTCTTTGAAGGAGCATCTGACTCTGGGAAAATCAGCAAATCTGCCTTGAAGAACTGGGTGGTCAATGCATTCAGAGAGAGGAGAGCACTTGCTTTGACGTTGAATGATACCAAAACGGCAGTGAATAAACTTCATCGGATGCTCAATGTTATAGTCGCCATTGTTATACTTGTCATTGCACTCTTAATATTGGAAATTGCCACAaccaaatttcttctctttgtgAGTTCACAGCTTGTCGTGGTGGCATTTATATTTGGAAATACCTGCAAGACTATATTTGAAGCAATCATTTTCCTGTTTGTCATGCACCCATTTGATGTGGGAGATAGGTGTGAAATTGATGGGGTCCAGATGGTTGTAGAAGAAATGAACATATTGACAACCGTATTCTTGAGATATGATAACCAGAAGATTATATTCCCTAACAGTGTTCTTGCTACTAAGGGCATAAATAATTACTACCGGAGTCCTGACATGGGAGATGCTGTTGACTTCTCCATACATATTGCCACTCCAGCTGAAAAGATTGCACAATTGAGACACAGAATACAGAGTTTTATTGATAACAAGAAGGAGCACTGGTATCCTTCACCTCTGATAGTGTTCAGGGACTTCGACCAACTAAACATGGTAAAATTGTCAGTTTGGCCAACTCATAGAATGAACCACCAAGACATGGGAGAAAGATTTGTGAGGAGATCCCTTTTGGTTGAGGAGATGATCAAAATTTTCCGGGAGCTCGATATTCAGTACCGTCTCCTTCCTCTTGATATCAGCGTTCGAAGCATGCCTACCACTTCTGAAAGGATTCCACCCAGTTGGGCAACAATCACATCTTG 2603 0.4161 MSTATSSSASHRGEVIVKIDGSDPAAAQGSKIWRESSIDFWSDGKDDDKNVTSGRGVNGDEEGFKFRQGTEDPPSKLIGKFLHKQRASGDMSLDMDLEMDELKHDRNLHPVDESPMTNRISKDLKVSFEEPELEIAPDSVRRRHNKEGQGDEEFPRPPLPPHHDGGGDGEVVRCTSNRSFERKSALLKAKTKSRLLDPPEEPDRRSGRVLKSGQLFSGMLGKKGDDEEDDPFWEEDLPDEFKKTHFSLWVLLEWLSLVLIIGALACTLSIPYLRNKNLWKLKLWKWEVMVLVLICGRLVSDWVIRILVFFIERNFLLRKRVLYFVYGIRKAVQKTLWLGFVLIAWHILFDKRVERETRSNFLQYVTKVLVCFLVGTLVWLVKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLIEIQKSEEEEERLADEVRKLQNAGVNIPPDLKATAFSSIQNKKTMKSGTLQKSPRIRSGKFSRPLSNNADDGITIDHLHKLNPKNISAWNMKRLMNIVRYGTLSTLDEQILDTAHEDENATQIRSENEAKAAAKKIFQNVARRGSRYIYLEDLMRFMRDDEALKAMNLFEGASDSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNVIVAIVILVIALLILEIATTKFLLFVSSQLVVVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTVFLRYDNQKIIFPNSVLATKGINNYYRSPDMGDAVDFSIHIATPAEKIAQLRHRIQSFIDNKKEHWYPSPLIVFRDFDQLNMVKLSVWPTHRMNHQDMGERFVRRSLLVEEMIKIFRELDIQYRLLPLDISVRSMPTTSERIPPSWATITS 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02379 867 Coils Coil 423 443 - -
Bva14g02379 867 MobiDBLite consensus disorder prediction 38 69 - -
Bva14g02379 867 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 4 116 - -
Bva14g02379 867 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 154 865 - -
Bva14g02379 867 MobiDBLite consensus disorder prediction 107 159 - -
Bva14g02379 867 Pfam Mechanosensitive ion channel 634 838 IPR006685 GO:0016020|GO:0055085
Bva14g02379 867 Gene3D - 692 741 IPR023408 -
Bva14g02379 867 MobiDBLite consensus disorder prediction 107 172 - -
Bva14g02379 867 SUPERFAMILY Sm-like ribonucleoproteins 682 741 IPR010920 -
Bva14g02379 867 MobiDBLite consensus disorder prediction 1 76 - -
Bva14g02379 867 PIRSF Memb_At2g17000 2 867 IPR016688 -
Bva14g02379 867 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 4 116 IPR016688 -
Bva14g02379 867 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 154 865 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02379 Bva-Chr14 20449384 20469068 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02379 9 867 Mechanosensitive Ion Channel Family AT1G78610 59.081 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02379 K22048 - gmx:100789882 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02379 14 20449384 20469068 Bva14g02379 14 20449384 20469068 ECH