Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02377 ATGGATTTCTCGTTgagaaaatcttttaaatcCTATGGTTCCTACAAAAATTCCAGAAAGATCTCTGCGGGGGAAGGCACAGACAACACTAACGAAAAGCTTCCCGTTCTCTTAGATCAAGAGGACCGCAGTCGGCATCCTTGTTCTTCACCAATGTCGACTGCTACTTCTTCTGCTTCTGACAGGGGAGAGGTTATCGTTAAAATCGACGGTAGTGACCCTGCAGCTGCACAGGGGAGTAAGATTTGGAGGGAATCCAGCATTGATTTCTGGAGCGATGGTAAGGATGATGACAAGAATGTGACTAGTGGTCGAGGTGTTAACGGTGATGAAGAGGGTTTTAAGTTCCGGCGGGGAACGGAGGAATCACCTTCGAAGCTGATTGGCAAGTTCTTTCACAAACAGAGAGCCTCCGGTGACGTGTCACTGGATATGGACTTAGAGATGGACGAGCTCAAACACGACCTTAACATACGTCCGGTGGACGAGTCTCCGATGACGAATCGGATTTCGAAGGACCTCAAAGTGTCTTTCGAGGAACCGGAACTTGAGATAGCTCCGGATTCTGTAAGGCGAAGGCATAATAAGGAGGGGCAAGGTGACGAAGAATTTCCAAGACCTCCACTTCCGCCGCATCACGATGGTGGTGGAGATGGAGAGGTTGTGAGGTGTACTTCGAACCGCTCCTTTGAAAGGAAGTCTGCCTTGTTAAAGGCCAAAACTAAGTCAAGATTATTGGACCCACCAGAGGAACCCGACCGGAGGTCTGGTCGGGTACTGAAATCGGGTCAATTATTCTCGGGGATGCTGGGGAAGAAAGgggatgatgaagaagatgatcCATTTTTGGAAGAGGATCTACCCGATGAGTTCAGAAAAACCCACTTCAGCTTATGGGTTTTCCTTGAGTGGTTGAGTTTGGTTTTGATAATTGGTGCTTTAACGTGCACACTTTCTATTCCCTATTTGAGGAATAAGAATCTCTGGAAGCTCAAGTTATGGATATGGGAGGTGATGGTTCTGGTTCTAATTTGTGGGCGCTTAGTTTCTGATTGGGTAATCCGGATATTGGTATTCTTCATCGAAAGGAATTTCCTTTTGCGGAAGAGAGTACTCTACTTTGTGTATGGTATCAGAAAGGCAGTTCAAAAGACTCTATGGTTGGGTTTTGTATTGATTGCTTggcatatattatttgataagaGAGTTGAGAGGGAGACTAGAAGAAACTTCCTTCAATATGTCACCAAGGTTTTGCTCTGTTTCTTGGTGGGTACTCTGGTATGGCTGGTGAAAACTCTTGTGGTTAAGGTGCTGGCTTCTTCTTTCCATGTAAGCACCTACTTTGATAGGATTCAGGAGTCACTCTTTAATCAATTCGTGATTGAAACACTCTCAGGTCCACCATTGATAGAAATTCAAAAGTCAGAGGAAGAGGAGGAAAGGCTTGCTGACGAGGTTCGGAAGTTGCAGAACGCTGGAGTTAATATACCCCCTGACCTTAAGGCAACTGCCTTCTCTTCAATTCAGAATAAAAAAACGATGAAGAGCGGAACGCTCCAAAAAAGTCCCAGGATCAGAAGTGGGACATTTTCTCGCCCACTTTCCAATAATGCACACGATGGAATAACTATCGATCACTTACATAAGCTGAACCCGAAAAATGTCTCTGCCTGGAATATGAAAAGATTAATGAATATAGTCCGTTATGGGACTCTTTCTACGCTGGATGAGGAGAAACTCGATACTGCTCATGAAGATGAAAATGCCACACAgattagaaatgaaaatgaggcTAAAGCAgcagcaaagaaaatatttcaaaatgttGCTAGGCGAGGATCCAGGTGTATATACCTGGAGGATTTGATGCGTTTTATGAGAGATGATGAAGCTGTAAAAGCAATGAATCTCTTTGAAGGAGCATCTGACTCTGGGAAAATCAGCAAATCTGCCTTGAAGAACTGGGTGGTCAATGCATTCAGAGAGAGGAGAGCACTTGCTTTGTCGTTGAATGATACCAAAACGGCAGTGAATAAACTCCATCGGATGCTCAATGTTACAGTCGCCATTGTTATTCTTGTCATTGCACTCTTAATATTGGAAATTGCCACAaccaaatttcttctctttttgagTTCACAGCTTGTCGTGGTGGCATTTATATTTGGAAATACCTGCAAGACTATATTTGAAGCAATCATTTTCCTGTTTGTCATGCACCCATTTGATGTGGGAGATAGGTGTGAAATTGATGGGGTCCAGATGGTTGTAGAAGAAATGAACATATTGACAACCGTATTCTTGAGATATGATAACCAGAAGATTATATTCCCTAACAGTGTTCTTGCTACTAAGTGCATAAATAATTACTACCGGAGTCCTGACATGGGAGATGCTGTTGACTTCTCCATACATATTGCCACTCCAGCTGAAAAGATTGCACAATTGAGACACAGAATACAGAGTTTTATTGATAACAAGAAGGAGCACTGGTATCCTTCACCTCTGATAGTCTTCAGGGACTTCGACCAACTAAACATGGTAAAATTGTCAGTTTGGCCAACTCATAGAATGAACCACCAAGACATGGGAGAAAGATTTGTGAGGAGATCCCTTTTGGTTGAGGAGATGATCAAAATTTTCCGGGAGCTCGATATTCAGTACCGTCTCCTTCCTCTTGATATCAGCGTTCGAAGCATGCCTACCACTTCTGAAAGGATTCCACCCAGTTGGGCAACAATCACATCTTG 2753 0.4192 MDFSLRKSFKSYGSYKNSRKISAGEGTDNTNEKLPVLLDQEDRSRHPCSSPMSTATSSASDRGEVIVKIDGSDPAAAQGSKIWRESSIDFWSDGKDDDKNVTSGRGVNGDEEGFKFRRGTEESPSKLIGKFFHKQRASGDVSLDMDLEMDELKHDLNIRPVDESPMTNRISKDLKVSFEEPELEIAPDSVRRRHNKEGQGDEEFPRPPLPPHHDGGGDGEVVRCTSNRSFERKSALLKAKTKSRLLDPPEEPDRRSGRVLKSGQLFSGMLGKKGDDEEDDPFLEEDLPDEFRKTHFSLWVFLEWLSLVLIIGALTCTLSIPYLRNKNLWKLKLWIWEVMVLVLICGRLVSDWVIRILVFFIERNFLLRKRVLYFVYGIRKAVQKTLWLGFVLIAWHILFDKRVERETRRNFLQYVTKVLLCFLVGTLVWLVKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLIEIQKSEEEEERLADEVRKLQNAGVNIPPDLKATAFSSIQNKKTMKSGTLQKSPRIRSGTFSRPLSNNAHDGITIDHLHKLNPKNVSAWNMKRLMNIVRYGTLSTLDEEKLDTAHEDENATQIRNENEAKAAAKKIFQNVARRGSRCIYLEDLMRFMRDDEAVKAMNLFEGASDSGKISKSALKNWVVNAFRERRALALSLNDTKTAVNKLHRMLNVTVAIVILVIALLILEIATTKFLLFLSSQLVVVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTVFLRYDNQKIIFPNSVLATKCINNYYRSPDMGDAVDFSIHIATPAEKIAQLRHRIQSFIDNKKEHWYPSPLIVFRDFDQLNMVKLSVWPTHRMNHQDMGERFVRRSLLVEEMIKIFRELDIQYRLLPLDISVRSMPTTSERIPPSWATITS 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02377 917 MobiDBLite consensus disorder prediction 94 121 - -
Bva14g02377 917 MobiDBLite consensus disorder prediction 513 533 - -
Bva14g02377 917 MobiDBLite consensus disorder prediction 180 223 - -
Bva14g02377 917 PIRSF Memb_At2g17000 48 917 IPR016688 -
Bva14g02377 917 Pfam Mechanosensitive ion channel 684 888 IPR006685 GO:0016020|GO:0055085
Bva14g02377 917 MobiDBLite consensus disorder prediction 180 209 - -
Bva14g02377 917 Coils Coil 473 493 - -
Bva14g02377 917 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 206 915 IPR016688 -
Bva14g02377 917 MobiDBLite consensus disorder prediction 13 63 - -
Bva14g02377 917 MobiDBLite consensus disorder prediction 47 61 - -
Bva14g02377 917 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 4 167 IPR016688 -
Bva14g02377 917 MobiDBLite consensus disorder prediction 13 29 - -
Bva14g02377 917 Gene3D - 742 791 IPR023408 -
Bva14g02377 917 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 206 915 - -
Bva14g02377 917 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 4 167 - -
Bva14g02377 917 SUPERFAMILY Sm-like ribonucleoproteins 732 791 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02377 Bva-Chr14 20432192 20464859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02377 59 917 Mechanosensitive Ion Channel Family AT1G78610 58.296 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02377 K22048 - gmx:102665658 1221.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02377 14 20432192 20464859 Bva14g02377 14 20432192 20464859 ECH