Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02376 ATGGATTTCTCGTTgagaaaatcttttaaatcCCATGGTTCCTACAAAAATTCCAGAAAGATCTCTGTGGGGGAAGGCACAGACAACAGTAACGAAAAGCTTCCCATTCTCTTGGATCAAGAGGACCGCAGTCGGCATCCTCGTTCTTCACCAATGTCGACTGctacttcttcttctgcttctgaTAGTGTAGAGGTTATCGTTAAAATCGACGGTAGTGACCCTGCAGCTGCACAGGGGAGTAAGATTTGGAGGGAATCCAGCATTGATTTCTGGAGCGATGGTAAGGATGATGACAAGAATGTGACTAGTGGTAGAGGTGTTAACGGTGATGAAGAGGGTTTTAAGTTCCGGCAGGGAACGGAGGATCCACCTTCGAAGCTGATTGGCAAGTTCTTGCACAAACAGAGAGCCTCCGGTGACATGTCACTGGATATGGATTTAGAGATGGAGGAGCTCAAACACGACCAGAACTTACATCCGGTGGACGAGTCTCCGATGACGAATCGGATTTCCAAGGACCTCAAAGTGTCTTTCGAGGAACCGGAACTTGAGATAGCTCCGGATTCTTTAAGGCGAAGGCATAATAAGGAGGGGCAAGGTGACGAAGAATTTCCAAGACCTCCACTTCCGCCGCATCACGATGGTGGTGGAGATGGAGAGTTTGTGAGGTGTACTTCGAACCGCTCCTTTGAAAGGAATTCTGCCTTGTTAAAGGCCAAAACTAAGTCAAGATTATTGGACCCACCAGAGGAACCCGACCGGAGGTCTGGTCGGGCACTGAAATCGGGTCAATTATTCTCGGGGATGCTGGGGAAGAAAGgggatgatgaagaagatgacCCATTTTTGGAAGAGGATCTACCCGATGAGTTCAAAAAAACCCACTTTAGCTTATGGGTTTTCCTTGAGTGGTTGAGTTTGGTTTTGATAATTGGTGCTTTAACATGCACACTTTCTATTCCCTATTTGAGGAATAAGTATCTGTGGAAGCTCAAGTTATGGAAATGGGAGGTGATGGTTCTGGTTCTAATTTGTGGGCGCTTAGTTTCTGATTGGGTAATCCGGATATTGGTATTCTTCATCGAAAGGAATTTCCTTTTGCGGAAGAGAGTACTCTATTTTGTGTATGGTATCAGAAAGGCAGTTCAAAAGACTCTATGGTTGGGTTTTGTATTGATTGCTTggcatatattatttgataagaGAGTTGAGAGGGAGACTAGAAGTAACTTCCTTCAATATGTCACCAAGGCTTTGGTCTGTTTCTTGGTGGGTACTCTGGTATGGCTGGTGAAAACTCTTGTGGTTAAGGTGCTGGCTTCTTCTTTCCATGTAAGCACCTACTTTGATAGGATTCAGGAGTCACTCTTTAATCAGTTCGTGATTGAAACACTCTCAGGTCCACCATTGATAGAAATTCAAAAGTCAGAGGAAGAGGAGGAAAGGCTTGCTGACGAGGTTCGGAAGTTGCAGAACGCTGGAGTTAATATACCCCCTGACCTTAAGGCAACTGCCTTCTCTTCAATTCAGAATAAAAAAACGATGAAGAGCGGAACGCTCCCAAAAGGTCCCAGGATCAGAAGTGGGAAGTTTTCTCGCCCACTTTCCAATAATGCAGACGATGGAATAACTATCGATCACTTGCATAAGCTGAACCCGAAAAATGTCTCTGCCTGGAATATGAAAAGATTAATGAATATAGTCCGTTATGGGACTCTTTCTACACTGGATGAGGAGAAACTCGATACTGCTCATGAAGATGAAAATGCCACACAgattagaaatgaaaatgaggcTAAAGCAgcagcaaagaaaatatttcaaaatgttGCTAGGCGAGGATCCAGgtGTATATACCTGGAGGATTTGATGCGTTTTATGAGAGATGATGAAGCTGTAAAAGCAATGAATCTCTTTGAAGGAGCATCTGACTCTGGGAAAATCAGCAAATCTGCCTTGAAGAACTGGGTGGTCAATGCATTCAGAGAGAGGAGAGCACTTGCTTTGTCGTTGAATGATACCAAAACGGCAGTGAATAAACTCCATCGGATGCTCAATGTTACAGTCGCCATTGTTATTCTTGTCATTGCACTCTTAATATTGGAAATTGCCACAaccaaatttcttctctttttgagTTCACAGCTTGTCGTGGTGGCATTTATATTTGGAAATACCTGCAAGACTATATTTGAAGCAATCATTTTCCTGTTTGTCATGCACCCATTTGATGTGGGAGATAGGTGTGAAATTGATGGGGTCCAGATGGTTGTAGAAGAAATGAACATATTGACAACCGTATTCTTGAGATATGATAACCAGAAGATTATATTCCCTAACAGTGTTCTTGCTACTAAGGGCATAAATAATTACTACCGGAGTCCTGACATGGGAGATGCTGTTGACTTCTCCATACATATTGCCACTCCAGCTGAAAAGATTGCACAATTGAGACACAGAATACAGAGTTTTATTGATAACAAGAAGGAGCACTGGTATCCTTCACCTCTGATAGTCTTCAGGGACTTCGACCAACTAAACATGGTAAAATTGTCAGTTTGGCCAACTCATAGAATGAACCACCAGGACATGGGAGAAAGATTTGTGAGGAGATCCCTTTTGGTTGAGGAGATGATCAAAATTTTCCGGGAGCTCGACATTCAGTACCGTCTCCTTCCTCTTGATATCAGCGTTCGAAGCATGCCTACCACTTCTGAAAGGATTCCACCCAGTTGGGCAACAATCACATCTTG 2756 0.4147 MDFSLRKSFKSHGSYKNSRKISVGEGTDNSNEKLPILLDQEDRSRHPRSSPMSTATSSSASDSVEVIVKIDGSDPAAAQGSKIWRESSIDFWSDGKDDDKNVTSGRGVNGDEEGFKFRQGTEDPPSKLIGKFLHKQRASGDMSLDMDLEMEELKHDQNLHPVDESPMTNRISKDLKVSFEEPELEIAPDSLRRRHNKEGQGDEEFPRPPLPPHHDGGGDGEFVRCTSNRSFERNSALLKAKTKSRLLDPPEEPDRRSGRALKSGQLFSGMLGKKGDDEEDDPFLEEDLPDEFKKTHFSLWVFLEWLSLVLIIGALTCTLSIPYLRNKYLWKLKLWKWEVMVLVLICGRLVSDWVIRILVFFIERNFLLRKRVLYFVYGIRKAVQKTLWLGFVLIAWHILFDKRVERETRSNFLQYVTKALVCFLVGTLVWLVKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLIEIQKSEEEEERLADEVRKLQNAGVNIPPDLKATAFSSIQNKKTMKSGTLPKGPRIRSGKFSRPLSNNADDGITIDHLHKLNPKNVSAWNMKRLMNIVRYGTLSTLDEEKLDTAHEDENATQIRNENEAKAAAKKIFQNVARRGSRCIYLEDLMRFMRDDEAVKAMNLFEGASDSGKISKSALKNWVVNAFRERRALALSLNDTKTAVNKLHRMLNVTVAIVILVIALLILEIATTKFLLFLSSQLVVVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTVFLRYDNQKIIFPNSVLATKGINNYYRSPDMGDAVDFSIHIATPAEKIAQLRHRIQSFIDNKKEHWYPSPLIVFRDFDQLNMVKLSVWPTHRMNHQDMGERFVRRSLLVEEMIKIFRELDIQYRLLPLDISVRSMPTTSERIPPSWATITS 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02376 918 MobiDBLite consensus disorder prediction 157 225 - -
Bva14g02376 918 PIRSF Memb_At2g17000 38 918 IPR016688 -
Bva14g02376 918 MobiDBLite consensus disorder prediction 515 534 - -
Bva14g02376 918 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 4 166 IPR016688 -
Bva14g02376 918 MobiDBLite consensus disorder prediction 49 63 - -
Bva14g02376 918 Pfam Mechanosensitive ion channel 685 889 IPR006685 GO:0016020|GO:0055085
Bva14g02376 918 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 209 916 IPR016688 -
Bva14g02376 918 SUPERFAMILY Sm-like ribonucleoproteins 733 792 IPR010920 -
Bva14g02376 918 MobiDBLite consensus disorder prediction 94 127 - -
Bva14g02376 918 MobiDBLite consensus disorder prediction 15 29 - -
Bva14g02376 918 MobiDBLite consensus disorder prediction 1 63 - -
Bva14g02376 918 MobiDBLite consensus disorder prediction 94 120 - -
Bva14g02376 918 Coils Coil 474 494 - -
Bva14g02376 918 MobiDBLite consensus disorder prediction 157 210 - -
Bva14g02376 918 Gene3D - 743 792 IPR023408 -
Bva14g02376 918 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 4 166 - -
Bva14g02376 918 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 209 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02376 Bva-Chr14 20428885 20447324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02376 60 918 Mechanosensitive Ion Channel Family AT1G78610 58.296 0.0 964
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02376 K22048 - gmx:100789882 1222.22