Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02349 ATGAACATCATCATGCATAACTTAGCTGAGAGAATAAGGCCAATTGTGGGTTCTAACGGCTGGGACTACTGTGTTTACTGGAAATTGAGGGAAGACCAAAGGTTTCTTGAGTGGATGGGATGCTGTTGTGCTGGGACTGAAAATGCTCAAAATGCTGGAGAAGAACTTCTTTTCCCTGTTTCCTCAGTGGCTTCATGCAGGGATACCATGTTTCCACACACCAGAACAAAGCCATGTGGTCTTCTTTCCCAACTCCCCACTTCCTTACCCATAGATTCTGGGATTCATGCAGAGACCCTGTTATCAAACCAACGCAATTGGCTGAACTATTCCAATGGCTTAAATTCAAGCATTTTGGAAGAAGCAATTGGGACCCAGGTTTTAATTCCTGTGCCTGGTGGACTAGTTGAGCTGTTTGTAACTAAACAGGTACCTGAAGATCATCAGGTGATAGAATTTGTCACAGCTCAGTACACGGTGTTAATGGAGCAGGAGGTAGTGAACCATTCTGTGAATATGGATGCAAGCTTCAATATGGACATGAATCCTATAAACCATTTACaaccaaattcatttttggGTGATGAAAATAATCACGGCGATCATTTTCAGCTACAAGTTTCTCCAACAACAGCTTCAGAGACTTCAAGCCTTCCCCACCACACCTCACTAGAACGAATCAGCCTCTGCAATAATTCTCCATTGAACTTCATGCAGCAATTCAATTACAACCCACGGGAAAGAATGAAAAGTGATGCCATTTTTGAAGAATCACAAAGTTCCTTTCTTTTGGATAAGCAAACGCACACACTTAAATCCATAGCAGCAAATGAGCATGAGCTTCAACAGATGGAAACATATCAGAAATGCATGATGACAGATACCCAAGAGGTGCATATCGTGGAGCCTTTGGACAAGAAGGAGCAACCAGGAGACGACAAGGATTTAATCAAACACGCGGTGGGTCGATCGGATTCACTGTCGGATTGCAGTGATCAGAATGACGATGAGGATGATGCAAAGTACAGGAGAAGGAATGGGAAAGGGAACCAATCAAAAAACCTTGAAGcagagaggaagagaaggaagaagctCAATGACAGGTTATACAACCTTCGATCTTTGGTACCCAGAATTTCAAAGTTAGATAGAGCGTCCATTCTTGGGGATGCAATTGAGTTCGTGAAGGATTTGCAGAAGCAAGCAAAAGAACTCCAAGATGAGCTTGAAGAATATTCAGATACAGGAAATGAAAACAACAACATCGACGGCATTGGCAACAACCATGTGGGTGTGCAACCAGAAATTCTTAGCCAAAATGGTGGTGATAACACAGAGCCAAAACCTGAAAATCTTAAAAACGAAGATGGGTTTCATGTGGGAACATCAGGAAATGGCTATATCTCGAAACAGAAACGGAACCAGAACTTGGATAATCCTAATGAGAAGCCAACACAACAGATGGAGCCGCAAGTGGAGGTGGCTTCGATAGAAGGGAATGAGTTTTTTGTGAAGGTGTTCTGTGAGCATAGGCCTGGTGGGTTTGTGAGGCTGATGGAGGCTTTCAACTCTCTAGGGATGGAAGTGATACATGCCACTGTAACCAGCCACAAAGGCCTTGTGTCTAATGTTTTCAAAGTAGAGAAGAAAGACAGTGAAATGGTTGAAGCTGAAGATGTGAGGGACTCTTTGCTGGAGCTTACGAGGAACCCAGCAAGAGTGTGGTGTGAGAATCAGATGGGTGCGTGTACAACATCATCAGATAATGGAATGGGCAAGGAGTATCAACATCACCACCAGATCATGGGAGCCTATCATCCCCACCAATTACACCATATTCATAACACTTG 1850 0.4249 MNIIMHNLAERIRPIVGSNGWDYCVYWKLREDQRFLEWMGCCCAGTENAQNAGEELLFPVSSVASCRDTMFPHTRTKPCGLLSQLPTSLPIDSGIHAETLLSNQRNWLNYSNGLNSSILEEAIGTQVLIPVPGGLVELFVTKQVPEDHQVIEFVTAQYTVLMEQEVVNHSVNMDASFNMDMNPINHLQPNSFLGDENNHGDHFQLQVSPTTASETSSLPHHTSLERISLCNNSPLNFMQQFNYNPRERMKSDAIFEESQSSFLLDKQTHTLKSIAANEHELQQMETYQKCMMTDTQEVHIVEPLDKKEQPGDDKDLIKHAVGRSDSLSDCSDQNDDEDDAKYRRRNGKGNQSKNLEAERKRRKKLNDRLYNLRSLVPRISKLDRASILGDAIEFVKDLQKQAKELQDELEEYSDTGNENNNIDGIGNNHVGVQPEILSQNGGDNTEPKPENLKNEDGFHVGTSGNGYISKQKRNQNLDNPNEKPTQQMEPQVEVASIEGNEFFVKVFCEHRPGGFVRLMEAFNSLGMEVIHATVTSHKGLVSNVFKVEKKDSEMVEAEDVRDSLLELTRNPARVWCENQMGACTTSSDNGMGKEYQHHHQIMGAYHPHQLHHIHNT 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02349 616 Gene3D - 336 414 IPR036638 GO:0046983
Bva14g02349 616 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 349 398 IPR011598 GO:0046983
Bva14g02349 616 MobiDBLite consensus disorder prediction 320 360 - -
Bva14g02349 616 PANTHER TRANSCRIPTION FACTOR ABORTED MICROSPORES 96 575 - -
Bva14g02349 616 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 96 575 - -
Bva14g02349 616 MobiDBLite consensus disorder prediction 415 447 - -
Bva14g02349 616 CDD ACT_UUR-ACR-like 504 567 - -
Bva14g02349 616 CDD bHLH_AtAMS_like 352 418 - -
Bva14g02349 616 SMART finulus 355 404 IPR011598 GO:0046983
Bva14g02349 616 MobiDBLite consensus disorder prediction 413 488 - -
Bva14g02349 616 Coils Coil 348 375 - -
Bva14g02349 616 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 351 413 IPR036638 GO:0046983
Bva14g02349 616 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 155 IPR025610 -
Bva14g02349 616 MobiDBLite consensus disorder prediction 336 360 - -
Bva14g02349 616 Coils Coil 388 415 - -
Bva14g02349 616 Pfam Helix-loop-helix DNA-binding domain 354 399 IPR011598 GO:0046983
Bva14g02349 616 MobiDBLite consensus disorder prediction 464 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02349 Bva-Chr14 20249842 20252339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02349 5 598 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 45.059 2.41e-150 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva14g02349 bHLH-MYC_N 5.6e-20 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02349 - - aprc:113871920 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02349 14 20249842 20252339 Bva14g02349 14 20249842 20252339 ECH