Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02329 ATGGGAAGGTCTCCTTGCTGTGAAAAAGCTCACACCAATAAGGGTGCATGGACCAAAGAGGAAGATGATAGGCTCATAGCTTATATTCGAGCTCACGGCGAGGGTTGCTGGCGCTCTCTCCCCAAAGCTGCCGGTCTCCTCCGTTGCGGCAAGAGTTGCCGTCTCCGGTGGATCAATTATCTCCGCCCTGACCTCAAGCGTGGCAATTTcactgaagaagaagatgaactCATAATTAAGCTCCACAGTCTCCTTGGTAACAAGTGGTCCCTGATTGCTGGAAGATTACCAGGAAGAACAGATAATGAGATAAAGAATTATTGGAACACTCATATCAGAAGGAAGCTGCTGAGCAGAGGAATTGACCCTGCAACTCATAGGCCTATAAACGAAGCTGCTGCTCAGAATCAAGAAGCCAACACAATATCTTTTGCTTCATCTGCTACTTctgctgctgttgctgctTGTAAACAAGAAGACAGCAAAGCAAACATGTTTCTGCAGATTAAAGAGCGGTGCCCAGATTTGAACCTTGAGCTAACAATCAGTCCACCCCATCAAAACCAGCCAGATCGGACATTGAAAAGTGGAGGGAGAAGCCTTTGTTTTGCTTGCTGTTTGGGTTTGCAGAATAGCAAAGATTGCAGCTGTGGAATTGGTAACATTAATGGCACCACCGGCGGCAGCCGCAGCAGCACAACTGGTTATGATTTCCTGGGAATGAAAAGTGGTGTTTTGGATTATAGAAGCTTGGAAATGAAATG 764 0.4411 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPINEAAAQNQEANTISFASSATSAAVAACKQEDSKANMFLQIKERCPDLNLELTISPPHQNQPDRTLKSGGRSLCFACCLGLQNSKDCSCGIGNINGTTGGSRSSTTGYDFLGMKSGVLDYRSLEMK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02329 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva14g02329 254 SMART sant 66 114 IPR001005 -
Bva14g02329 254 SMART sant 13 63 IPR001005 -
Bva14g02329 254 CDD SANT 69 112 IPR001005 -
Bva14g02329 254 PANTHER TRANSCRIPTION REPRESSOR MYB4 1 222 - -
Bva14g02329 254 CDD SANT 16 61 IPR001005 -
Bva14g02329 254 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 222 - -
Bva14g02329 254 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva14g02329 254 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bva14g02329 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva14g02329 254 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva14g02329 254 Gene3D - 69 143 - -
Bva14g02329 254 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva14g02329 254 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bva14g02329 254 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02329 Bva-Chr14 20096819 20098006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02329 1 254 MYB Transcription Factor Family AT4G38620 58.824 5.63e-111 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva14g02329 Myb_DNA-binding 3.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02329 K09422 - pop:7494250 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02329 14 20096819 20098006 Bva14g02329 14 20096819 20098006 ECH