Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02299 ATGGATTGTGCAGCTGCAAGAAAAACTCAGAAGGCTGACAGAGAAAAATTAAGGAGGGATCGGCTCAATGAACAGTTTGTTGAACTGGGCAACATTTTAGATCCTGACAGGCCCAAAAATGACAAAGCAACTATTCTGGCTGATACCATTCAATTGCTGAAGGACATTACTTCTCAAGTTAGTAAACTTAAGGATGAATATGCAATGCTAACTGAAGAATCTCGGGAGTTGACTCAGGAGAAAAATGAtctgagagaagagaaggctTCTCTTAAGTCCGATATTGAGAATCTTAATAATCAGTATCAGCAGCGGCTGAGGACAATGTTCCCATGGACTGCAATGGATCACTCAGTTGTGATGGCTCCACCTTCATATCCATATCCAGTGCCAGTGCCAGTCCCTTCTGGTCCTATGCCCATGCAGCCATATCCCTTCTTTGCAAATCAAAATCCCGGCGTCATCCCTAACCCCTGTTCAACATTTGTTCCTTATTTAACCCCTAATGCCCTCGTTGAACAACAATCCACCCAATATGTATCCCCACAAATTCATCTTGGTAGTCAGTCCCGAGCATCAGGCAAACGAGATTCCAAAAACAAATCATCCAGGGAGAGCAAGGTTGAAAATAGTGAGGGTTCTAATGATGTCACTACAGAGCTGAAGTTGAATACTCCTGGGTCTACTTCAAATCAGGATTTATCatctggaaaaagaaaatccagcAAGGAAAATAGTTCCACAGAAGGGGGTTCATCAGGTAGTTCTTCACCTCATAGTGTACAAGATAGCTCATCAAGTAGTGCAATTGAAAGTAGAAAGGCCGATGACTA 833 0.4058 MDCAAARKTQKADREKLRRDRLNEQFVELGNILDPDRPKNDKATILADTIQLLKDITSQVSKLKDEYAMLTEESRELTQEKNDLREEKASLKSDIENLNNQYQQRLRTMFPWTAMDHSVVMAPPSYPYPVPVPVPSGPMPMQPYPFFANQNPGVIPNPCSTFVPYLTPNALVEQQSTQYVSPQIHLGSQSRASGKRDSKNKSSRESKVENSEGSNDVTTELKLNTPGSTSNQDLSSGKRKSSKENSSTEGGSSGSSSPHSVQDSSSSSAIESRKADD 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02299 277 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
Bva14g02299 277 PANTHER TRANSCRIPTION FACTOR BHLH121 1 276 - -
Bva14g02299 277 Coils Coil 5 25 - -
Bva14g02299 277 Pfam Helix-loop-helix DNA-binding domain 7 55 IPR011598 GO:0046983
Bva14g02299 277 MobiDBLite consensus disorder prediction 212 236 - -
Bva14g02299 277 MobiDBLite consensus disorder prediction 246 269 - -
Bva14g02299 277 MobiDBLite consensus disorder prediction 181 277 - -
Bva14g02299 277 MobiDBLite consensus disorder prediction 192 211 - -
Bva14g02299 277 PANTHER TRANSCRIPTION FACTOR BHLH121 1 276 IPR044579 GO:0003700|GO:0055072
Bva14g02299 277 CDD bHLH_AtILR3_like 11 85 - -
Bva14g02299 277 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 75 IPR036638 GO:0046983
Bva14g02299 277 SMART finulus 12 62 IPR011598 GO:0046983
Bva14g02299 277 Coils Coil 46 108 - -
Bva14g02299 277 Gene3D - 4 88 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02299 Bva-Chr14 19862534 19865547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02299 4 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 62.712 2.93e-92 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva14g02299 HLH 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02299 - - cam:101491902 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02299 14 19862534 19865547 Bva14g02299 14 19862534 19865547 ECH