Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02285 ATGGCCAttagaaaatcaaacaagCTGCCCCAAACGGCAGTCATCAAGCAAATCCTTAAGAGATGTTCAAGCTTAGGCAAGAAAAATGGGTATGACGATGATGGGTTGCCTCTTGATGTCCCAAAAGGCCATTTTGCTGTTTATGTTGGTGAAAACAGAAGTAGGTACATTGTCCCAATTTCGTTTTTGACTCACCCAGAATTCCAATCCCTCCTTCGACAagctgaagaagaatttggcttcgatcatgATATGGGTCTCACTATTCCTTGTGAAGAGGTCGTTTTCCGGTCCCTAACATCAACGCTGAGATG 314 0.3822 MAIRKSNKLPQTAVIKQILKRCSSLGKKNGYDDDGLPLDVPKGHFAVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCEEVVFRSLTSTLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02285 104 Pfam Auxin responsive protein 34 102 IPR003676 GO:0009733
Bva14g02285 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Bva14g02285 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02285 Bva-Chr14 19722006 19722746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02285 5 103 Calmodulin-binding Proteins AT4G34750 41.414 4.55e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02285 K14488 - vvi:100257133 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02285 14 19722006 19722746 Bva14g02285 14 19722006 19722746 ECH
Bva14g02285 14 19722006 19722746 Bva08g00842 08 4327466 4327892 ECH