Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02284 ATGTCACCGGGCGTCGGAAAGCGTAGTAAAATCCGGCACATTGTGCGAATCAGGCAAATGCTACTCCAGTGGCGCAAGAAAGCTCGAATAACGGCAGCGCTTGCGCCTTCTGATGTTCCCGCCGGGCACGTGGCCGTATGTGTAGGTCCAAGTAGCAGGAGGTTTATTGTGCGCGCGACGTACTTGAACCACCCCATCTTCAAGAAGCTTCTGGTGCAAGCCGAAGAAGAGTACGGCTTCTGCAACCAAGGTCCCTTGACGATCCCCTGCGACGAGTCAGTCTTCGAAGAGCTGTTACGGGTCATGTCTCGATCTGGATCGGGTCACTCGGCCCGCTTCTTTAGCCTCGAAGATTTCCAGAGGCGTTGCCACGTGGATGTCCGGAGTAATTTTGACCTGGTAGGAGAATCCTGGCCGTTGCTTCATGAGAAGCCCGTCTGCTA 443 0.5508 MSPGVGKRSKIRHIVRIRQMLLQWRKKARITAALAPSDVPAGHVAVCVGPSSRRFIVRATYLNHPIFKKLLVQAEEEYGFCNQGPLTIPCDESVFEELLRVMSRSGSGHSARFFSLEDFQRRCHVDVRSNFDLVGESWPLLHEKPVC 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02284 147 Pfam Auxin responsive protein 17 101 IPR003676 GO:0009733
Bva14g02284 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 143 IPR003676 GO:0009733
Bva14g02284 147 PANTHER SMALL AUXIN-UP RNA-RELATED 6 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02284 Bva-Chr14 19712181 19712908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02284 5 147 Calmodulin-binding Proteins AT4G34750 51.634 2.43e-44 141
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02284 14 19712181 19712908 Bva14g02284 14 19712181 19712908 ECH