Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02279 ATGGGTGACACTGAAGAAGCCAATACTGATATGATGCAAAGGCTTCAATCCTCTTTTGGAACTTCTTCATCTTCGATGATGAAACAACCTTTATCTATGGAGCAACTCAGTATACCCCAATTCAACCCCTCACAAATGCGTGCCCGGCATTTTCAGCAGAATTTTGGtggagataataataaaagagtaGGAATACCACCATCACATCCTCACCAGATCCCTCCCATTTCTCCATATTCCCAGATCCCAGTCTCGCGCCAAACCCAGCAATTGGGCTCACAGAGCACTAGCCCAGGACCTACTCACTCACGATCGTTATCTcagtcttcttttttctctcttgattCTCTGCCTCCTTTGAGTCCGTCCCCTTTTCGCGACTCCTCGTCATCAGACCAAGCTTCAGCTGATGTATCAATGGAGGATCGGGATGTTAGTTCACATTCTTTGTTGCCACCTTCTCCTTTTCCAAGGGGTAACCCTTCAAGGGTTGGAGACAGTTTACCTCCTCGTAAAGTACACAGGCGTTCTAACAGTGATATTCCATTTGGGTTTTCTTCTATCATGCAATCTTCTCCACCCCTTGTTCCTCTGAGGGGCTCGGGTGGATTGGAGAGGTCAATGTCTGGCAGAGAAAATTCTGGGATAGCGAAGCCTGTACAATTGGTTAAAAGAGAAACGAGTTGGGATAGAGGTGTTGACCACAATGCAGAGGTTTCCAGTGAGAAGAAATCTCCTGAAGGAGAGGTTGTGGATGATCTATTCTCTGCATACATGAATTTGGATAACATTGATGCACTAAACTCTTCTGGGACCGATGATAAAAATGGTGGTGAAAATCGTGATGATTTGGATAGTAGGGCTAGtggaacaaaaacaaatggaGGTGATAGTAGTGATAATGAAGCTGAAAGCAGTGTGAATGAAAGTGGCGGCAATGTGCCAAGACAGGGAAGTGAAAAGAGGGAAGCAATGAAAAGGAGTGCAGGAGGAGATATTGCACCAACCAGCAGGCACTACAGGAGTACATCAATGGATAGTTTCATTGGGAAGTTGAACTTCAATGATGATTCACCTAAACTGCCACCTTCACCTGGTACTCGTCCTGGTCAACTTTCACCCGGCAATTCAATTGACGGTAATTCAGCTGCCTTTAGCCTGGAGTTTGGAAATGGCGAATTTAGTGGGCCTGAGTTGACGAAAATCATGGCCAATGAAAAACTTTCTGAGATTGCATTAACCGATCCAAAACGTGCAAAAAGGATATTGGCAAATCGTCAATCAGCTGCTCGGTCAAAAGAGCGAAAGATGCGGTACATTTCTGAATTAGAACATAAGGTGCAGACTCTACAAACTGAAGCCACTACACTGTCTGCACAGCTTACTCTCTTACAGAGAGACTCTGTTGGACTCACAAACCAGAATAATGAGTTGAAGTTTCGCTTCCAAGCCATGGAACAACAGGCAAAACTCCGAGATGCTCTAAATGAAGCATTAACTGCTGAGGTTCAACGACTAAAGATCGCTACGGCCGAGTTGAATGGTGACTCTCGCCCTTCCAACAACTTGATCCCTCAGCTTTCTTTCAATCCTCAGATGTTCCAATTGCAGCAACAGCAGCATCCACCTTCTTCATCCCAACTAAACATTCATCtgcaacagcagcagcagcggCAGAATGGTAGCACCACCACAAAAGCCGAGTCAAAAGAGTA 1715 0.4315 MGDTEEANTDMMQRLQSSFGTSSSSMMKQPLSMEQLSIPQFNPSQMRARHFQQNFGGDNNKRVGIPPSHPHQIPPISPYSQIPVSRQTQQLGSQSTSPGPTHSRSLSQSSFFSLDSLPPLSPSPFRDSSSSDQASADVSMEDRDVSSHSLLPPSPFPRGNPSRVGDSLPPRKVHRRSNSDIPFGFSSIMQSSPPLVPLRGSGGLERSMSGRENSGIAKPVQLVKRETSWDRGVDHNAEVSSEKKSPEGEVVDDLFSAYMNLDNIDALNSSGTDDKNGGENRDDLDSRASGTKTNGGDSSDNEAESSVNESGGNVPRQGSEKREAMKRSAGGDIAPTSRHYRSTSMDSFIGKLNFNDDSPKLPPSPGTRPGQLSPGNSIDGNSAAFSLEFGNGEFSGPELTKIMANEKLSEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRFQAMEQQAKLRDALNEALTAEVQRLKIATAELNGDSRPSNNLIPQLSFNPQMFQLQQQQHPPSSSQLNIHLQQQQQRQNGSTTTKAESKE 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02279 571 MobiDBLite consensus disorder prediction 535 571 - -
Bva14g02279 571 MobiDBLite consensus disorder prediction 289 315 - -
Bva14g02279 571 MobiDBLite consensus disorder prediction 535 564 - -
Bva14g02279 571 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 415 478 IPR004827 GO:0003700|GO:0006355
Bva14g02279 571 Coils Coil 433 467 - -
Bva14g02279 571 CDD bZIP_plant_RF2 418 467 IPR044759 GO:0003700|GO:0006355
Bva14g02279 571 Coils Coil 496 516 - -
Bva14g02279 571 SMART brlzneu 413 477 IPR004827 GO:0003700|GO:0006355
Bva14g02279 571 MobiDBLite consensus disorder prediction 180 194 - -
Bva14g02279 571 MobiDBLite consensus disorder prediction 265 379 - -
Bva14g02279 571 Gene3D - 416 468 - -
Bva14g02279 571 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 77 561 - -
Bva14g02279 571 MobiDBLite consensus disorder prediction 9 59 - -
Bva14g02279 571 SUPERFAMILY Leucine zipper domain 417 468 IPR046347 GO:0003700|GO:0006355
Bva14g02279 571 MobiDBLite consensus disorder prediction 78 136 - -
Bva14g02279 571 Pfam bZIP transcription factor 417 471 IPR004827 GO:0003700|GO:0006355
Bva14g02279 571 MobiDBLite consensus disorder prediction 224 250 - -
Bva14g02279 571 MobiDBLite consensus disorder prediction 1 251 - -
Bva14g02279 571 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 77 561 - -
Bva14g02279 571 MobiDBLite consensus disorder prediction 337 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02279 Bva-Chr14 19654978 19659265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02279 1 571 bZIP Transcription Factor Family AT4G38900 59.391 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva14g02279 bZIP_1 5.8e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02279 14 19654978 19659265 Bva14g02279 14 19654978 19659265 ECH