Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02258 ATGGAGGTTGTGATGGCCAAAGCGTTCAAGTCAAGTTCGTGCAGAGAATTAGCTTTCATGAAATCGACCCCGCAGGCTTTTTACGATGACTATTGGTGCTTCAATCAAAATAACGGGGTTTCTGGTGAAGATTTCTCTGTGGACGACTTACTTGACTTCTCCAACGGTGAATTCCAACATGGACATTTTGGTGTTGGGAACGGTGATAATTACGAAGAAGACGACGAAGAGAAAGACAGCCTTTCTGTTTCCTCACAGGACCGTGGTGAAGATGATAGCAACTCCAATTCCAGTAGTGTTTCCGGCGGCGGCGCCGATTCCCAGTCCTTCTTTGCCAGCGAACTAGCCGTTCCGgTGGATGATTTGGCGGAACTGGAGTGGGTTTCTCATTTTGTGGATGATTCTCTCCCGGAGCTGTCGCTTTTGTATCCTGTACATTCAGAGCAAACGAAGAAGAGAACTGAACCGGAACCTAAACCGGGCATGACGGAAAAGCCTTGTTTCCCTTCAAGAGTACCCGTTAAAATGAGAAGTAAGAAGAGTCGAAAAGCCAACGCTAGGGCCTGGTCGTTTAGCCCATTACTATCCGGGTCAGGGTCATCTTCTTCGTCGTCTTCATGTTCTTCTGGGTTTTCCTCAACGCCGGCTCTAATTTTCGCCGGCAGCGTTCCAAACTTGGAATTCTCAGAAGGCCTTGGGGAACCGCCGGCcaagaagcagaagaaaaagtcGGAGACACAAACTGGTGGGTCCCAATTTCAGCGTCGGTGTAGTCACTGCCAGGTGCAGAAAACCCCACAATGGCGAACCGGTCCACTAGGTGCCAAAACGCTTTGTAACGCATGTGGAGTTCGTTTTAAGTCCGGTCGGCTTTATCCGGAGTACAGACCGGCTTGTAGTCCAACCTTTTCCAGCGAAGTTCACTCAAACAGCCATCGTAAAGTGTTAGAAATGAGAAGGAGGAAGGAGATGATGACGGCTGGAACCCAGTCCGGGTTGACCCAGGCAACAATGGTTCCGAGTTGCTG 1028 0.4874 MEVVMAKAFKSSSCRELAFMKSTPQAFYDDYWCFNQNNGVSGEDFSVDDLLDFSNGEFQHGHFGVGNGDNYEEDDEEKDSLSVSSQDRGEDDSNSNSSSVSGGGADSQSFFASELAVPVDDLAELEWVSHFVDDSLPELSLLYPVHSEQTKKRTEPEPKPGMTEKPCFPSRVPVKMRSKKSRKANARAWSFSPLLSGSGSSSSSSSCSSGFSSTPALIFAGSVPNLEFSEGLGEPPAKKQKKKSETQTGGSQFQRRCSHCQVQKTPQWRTGPLGAKTLCNACGVRFKSGRLYPEYRPACSPTFSSEVHSNSHRKVLEMRRRKEMMTAGTQSGLTQATMVPSC 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02258 342 PIRSF Txn_fac_GATA_plant 5 341 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bva14g02258 342 MobiDBLite consensus disorder prediction 147 182 - -
Bva14g02258 342 MobiDBLite consensus disorder prediction 87 105 - -
Bva14g02258 342 Pfam GATA zinc finger 257 290 IPR000679 GO:0006355|GO:0043565
Bva14g02258 342 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 252 313 - -
Bva14g02258 342 PANTHER GATA TRANSCRIPTION FACTOR 1 341 - -
Bva14g02258 342 Gene3D - 250 301 IPR013088 GO:0006355|GO:0008270
Bva14g02258 342 ProSiteProfiles GATA-type zinc finger domain profile. 251 287 IPR000679 GO:0006355|GO:0043565
Bva14g02258 342 CDD ZnF_GATA 256 313 IPR000679 GO:0006355|GO:0043565
Bva14g02258 342 MobiDBLite consensus disorder prediction 62 105 - -
Bva14g02258 342 MobiDBLite consensus disorder prediction 229 256 - -
Bva14g02258 342 PANTHER GATA TRANSCRIPTION FACTOR 1 341 - -
Bva14g02258 342 ProSitePatterns GATA-type zinc finger domain. 257 282 IPR000679 GO:0006355|GO:0043565
Bva14g02258 342 SMART GATA_3 251 305 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02258 Bva-Chr14 19289604 19291151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02258 8 340 C2C2-Gata Transcription Factor Family AT5G66320 44.767 1.92e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva14g02258 GATA 2.3e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02258 - - adu:107476627 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02258 14 19289604 19291151 Bva14g02258 14 19289604 19291151 ECH
Bva13g01765 13 14278715 14281183 Bva14g02258 14 19289604 19291151 ECH