Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02248 ATGGCATTGCTCAAGTTTAAAGAATCCATAAccaaagacccaaatggaatACTAGGCTCCTGGAATGGCTCAACTCACTTCTGCAACTGGGTTGGAGTAAGATGCGACCGGAAGAACCAGAGGGTTACAGCCTTGGAACTAAATGGCTATGGGCTTGGTGGATTGCTATCACCATATACTGGCAACCTCTCTTTTGTCAGATCTATCATGCTCTGCAATAACAGTTTTTCTGGCCGTATTCCACTGGGAGTTGGACGTTTGTTTCGTCTACAACAATTTTTGCTTTGGAATAACACACTCAGTGGAGAAGTTCCAATAAGCTTGGCCAATTACTCTCAACTCAGAATCATAGACTTGTCAACAAATCATTTAACAGGGTCTATACCTATGGAGTTTGGCTCCTTAATGAAACTTGAAGAGATTTACTTAGGAAAGAATATTCTCACAGATGTGGCTTCTGCTTTGCAATATCTTCACCATGAATGTGAACAGCCAATTGTTTATTGTGACTTAAAGCCTAGTAATATTCTGCTTGATTCTAATCTTGTGGCTCATGTGAGTGATTTCGGTTTAGCAAGACTTCTCTCGACTTCTAATCAAGTTTCTGAAGGTAAATCTAGCACAATTGGATTGAAGGGTTCCGTGGGCTATGCAGCTCCAGAATATGGCATTGGAGGAGAAGCTTCAAAGGAGGGTGATGTCTATAGCTTTGGGATCCTTCTGTTAGAGATGTTCACAGGAAAGAGACCCACTGAGGAGATGTTCGTGGATGAGTTTAATCTTCATAGTTATGTGAAAGTCGCATTAGCTGAAAAACTTTTGCAGGTTGTAGACCCCATTCTTGGCTCAAGAAGAAACAGAAGAGCGAAATGGAGAGACTA 881 0.4052 MALLKFKESITKDPNGILGSWNGSTHFCNWVGVRCDRKNQRVTALELNGYGLGGLLSPYTGNLSFVRSIMLCNNSFSGRIPLGVGRLFRLQQFLLWNNTLSGEVPISLANYSQLRIIDLSTNHLTGSIPMEFGSLMKLEEIYLGKNILTDVASALQYLHHECEQPIVYCDLKPSNILLDSNLVAHVSDFGLARLLSTSNQVSEGKSSTIGLKGSVGYAAPEYGIGGEASKEGDVYSFGILLLEMFTGKRPTEEMFVDEFNLHSYVKVALAEKLLQVVDPILGSRRNRRAKWRD 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02248 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Bva14g02248 293 Pfam Leucine rich repeat N-terminal domain 2 36 IPR013210 -
Bva14g02248 293 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 149 - -
Bva14g02248 293 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 146 287 - -
Bva14g02248 293 Gene3D Ribonuclease Inhibitor 1 111 IPR032675 -
Bva14g02248 293 SMART serkin_6 50 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g02248 293 Pfam Protein kinase domain 144 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g02248 293 SUPERFAMILY L domain-like 2 160 - -
Bva14g02248 293 SUPERFAMILY Protein kinase-like (PK-like) 143 263 IPR011009 -
Bva14g02248 293 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 146 287 - -
Bva14g02248 293 ProSiteProfiles Protein kinase domain profile. 1 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g02248 293 Gene3D Transferase(Phosphotransferase) domain 1 134 292 - -
Bva14g02248 293 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02248 Bva-Chr14 19178099 19180614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02248 146 278 Receptor kinase-like Gene Family AT3G47570 62.687 8.63e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva14g02248 Pkinase 5.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02248 - - pvy:116108690 261.536