Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02233 atgaagatCCAGTGTGATGTGTGTGGCAAAGAAGAAGCCTCTGTTTTCTGCTCTGCAGATGAAGCTGCACTCTGCCATGGCTGTGATCTTAGCATTCACCACGCGAACAAGCTCGCAGGCAAACACACGCGCTTCTCCCTGCACCGCTCAACCTCTAAAGAAATCCCTCTTTGCGATATCTGTCAAGAGAACCGGGCTTTTCTATTTTGCCAAGAAGACAGAGCAATCCTTTGCAGAGAATGCGACATTCCAATACACAGAGCCAATGAACTTACCCAGAAGCACAATAGATTTCTTCTCACGGACGTGAAGCTCTCCGGTTCTTCTCCGAACCCAGCTTCATCGTCATCTGGTGGCACTGATGTAGTCACCGGCGGCGAATTAAGGAGTTCTGGTTCCGATATAAGGACGCCCAGATCAATTTCCAGTGAAAATCTTTGTTCTCCTTCAATGGGAAATTCAATGGCGTCAGCAGCTACTTGCAAGGTTGAAGATGGCATGGTTAGTGACACGGGTTCAGCTTCAACAAGCAGCTTCTCTGAATATTTGATTGAGTCGATACCTGGCTATTGCTTCGAAGATCTTCTTGATGCTTCATTTGCACCAAATGGTTTCTGTAAGAATTTTGAGGTTGAACCAAAAATCCAAGAGCAGCTTTTGTTTCCATCTGAAGTTTTGGCTGCGTGGTTTCCTCAATTTCAAGCTCAGTCATCTTCAGCAAGTCTTACTCAGATTGGTTCTCTCGTTGGAGTTAAGGAAACTCCAAAAGCAAACGCTGCAACGGGGGATTGGCAATGGAGATATAATGGCCGTACagtttctcaactcaaaaaatCTGGACACTCTCGATA 851 0.4477 MKIQCDVCGKEEASVFCSADEAALCHGCDLSIHHANKLAGKHTRFSLHRSTSKEIPLCDICQENRAFLFCQEDRAILCRECDIPIHRANELTQKHNRFLLTDVKLSGSSPNPASSSSGGTDVVTGGELRSSGSDIRTPRSISSENLCSPSMGNSMASAATCKVEDGMVSDTGSASTSSFSEYLIESIPGYCFEDLLDASFAPNGFCKNFEVEPKIQEQLLFPSEVLAAWFPQFQAQSSSASLTQIGSLVGVKETPKANAATGDWQWRYNGRTVSQLKKSGHSR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02233 283 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Bva14g02233 283 MobiDBLite consensus disorder prediction 106 144 - -
Bva14g02233 283 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 214 - -
Bva14g02233 283 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Bva14g02233 283 Pfam B-box zinc finger 56 96 IPR000315 GO:0008270
Bva14g02233 283 CDD Bbox1_BBX-like 57 100 - -
Bva14g02233 283 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bva14g02233 283 SMART bboxneu5 53 100 IPR000315 GO:0008270
Bva14g02233 283 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bva14g02233 283 CDD Bbox1_BBX-like 5 47 - -
Bva14g02233 283 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 214 - -
Bva14g02233 283 Gene3D Classic Zinc Finger 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02233 Bva-Chr14 18932069 18933488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02233 1 233 C2C2-CO-like Transcription Factor Family AT1G75540 43.580 1.60e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bva14g02233 zf-B_box 2.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02233 - - gmx:100800981 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02233 14 18932069 18933488 Bva14g02233 14 18932069 18933488 ECH
Bva14g02233 14 18932069 18933488 Bva08g00825 08 4241202 4243920 ECH