Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02225 ATGGCTTCGGATTCTTCTCCAGCTCATTTCAACAATGGTCGTTCGTCGCCCGATGACTCCTTCTCCAGCCCAATCGGTAACACGTTATCTTCTCCCGGTGATGCATCTCAGAGAAGAAGGAGGCGCCGATCTTCGACGCCATCGGCGTTTGCAACGCCTCCACCGCAGCGATCCAGATTGGCTTCCGATGCAACCCCAACTCCATCGCGCTCCAGGCAAAGAGGGAATGGTCGTAGAGCCTCGTCGACCCCCCTCGCTGCAACTCCCACCTCCACCGACGATGTGCCCATGTCTTCAGAAGGCGGCGAGGGTTACGATATGGATGATATGAGGCCTACCTTCGTCTGGGGCACCAATATAAGCGTAGAAGATGTGAACGAGGCGATCCAGAGGTTTTTGAGGCACTTCAGAGCACACTCATCTCAGAGTGATGATTTATTTACTGAAGGGAAATATGAGAGGGCAATTAAAGATGTTATTGAAATTGAAGGGGAATCACTGGACGTCAATGCACGAGACGTATTTGATTATGATCCTGATCTGTACACGAAAATGGTTAGATACCCGCTCGAGGTTCTTGCAatttttgatttggttttgatGAATATGGTTAGTAGAATTAACCCTTTGTTCGAGAAGCACATTCAAACTCGGATATTTAATCTCAAAACCTCAACTTCGATGAGAAATTTGAACCCATCTGATATCGAGAGGATGATATCATTGAAGGGAATGGTTATAAGATGCAGCTCAATCATACCAGAAATCAGGGAAGCTATATTCAGATGTCTCGTGTGCGGATACTGCTCTGACCCAGTTGCTGTAGAGAGAGGACGAATAAGTGAACCCACTAAATGCTTGAGGGAAGAGTGTCAAGCCAAGAACTCCATGACACTGGTTCACAACCGATGCAGGTTTACTGATAAGCAAATTGTGAGGCTCCAGGAGACTCCTGATGAGATCCCTGAAGGAGGAACACCACACACAGTGAGCCTGCTGATGCATGACAAACTGGTGGATGCTGCAAAGCCAGGTGACAGAGTCGAGGTGACTGGTATCTACAGGGCTATGACTGTCAGGGTTGGACCAACTCAGAGAACTGTTAAATCATTGTTCAAGACTTATATTGATTGTCTTCACATAAAGAAGACTGATAATTCAAGGATGCTGTCAGAGGATGCCATGGAGGTTGAAAATGGGATGGGTAGAAATGCGGAAGAGATCGtttttgatgaagaaaagGTGGCTCAACTAAATGAGCTGTCGAAACAGCCAGATATATATGAAAGATTGACAAAATCGTTGGCGCCAAACATCTGGGAGTTAGATGATGTGAAGAAAGGTCTCCTTTGTCAgCTTTTTGGCGGGAGCGCTTTAAAGTTGAATTCTGGGGCGAGTTTCCGTGGTGATATCAATATTCTTCTTGTTGGTGATCCTGGAACAAGCAAGTCCCAGCTGCTCCAGTACATACACAAGCTATCTCCCCGTGGCATTTACACTAGTGGAAGGGGGAGCTCTGCTGTTGGTTTGACTGCTTATGTGTCCAAAGATCCTGAAACAGGCGAAACTGTTTTAGAGAGTGGTGCCCTAGTTTTGAGTGACAGAGGTATCTGCTGTATAGATGAATTTGACAAGATGTCTGATAATGCAAGGAGCATGTTGCATGAGGTGATGGAACAACAAACTGTGTCAATCGCTAAGGCAGGCATTATTGCTTCCCTCAATGCAAGGACTTCAGTGCTGGCTTGTGCAAATCCAAGTGGGTCAAGATATAATCCCCGCTTGTCTGTCATTGACAACATACACCTCCCTCCTACTCTTCTGTCCAGgtttgatttgatttacttAATTCTTGACAAGGCTGATGAGCAGACTGACAGAAGGCTTGCCAAACATGTTGTTTCCCTACACTTTGAGAATCCTGAGAGCTTGGAGCAGGACGTCATGGACATTTCTACATTAACTGCTTATGTGAGCTATGCCCGAAAGCATATACACCCGCAACTATCTGATGAAGCCGCAGAAGAATTGACAAGAGGTTAtgttgaaataagaaaaagaggaaattttCCTGGAAGCAGCAAAAAGGTGATAACAGCTACTCCGAGGCAGATTGAGAGTCTGATACGACTCAGCGAAGCCTTGGCTCGGATTCGCTTCTCAAATTGGGTCGAGAAGCGTGATGTGATGGAGGCATTTCGACTTCTGGAAGTTGCAATGCAGCAGTCTGCAACAGATCACTCTACTGGAACTATTGACATGGATCTTATTACCACTGGAGTTTCTGCAAGTGAAAGGATGAGACGAGAGAGTCTGCTACAAGCAACCCGCAACATAATCATGGAGAAAATGCAAATTGGCGGACCATCAATGCGATTATCAGAGTTATTGGAAGAGTTGAAGAAGCAGAGCAACACTGGCAGTGAAGTCCAACTTACTGATCTAAGGAATGCAGTTTCTACTCTGGCCGGTGAGGGTTTTGTAGCTTTGCATGGTGACAGCGTAAAAAGGTCATA 2516 0.4495 MASDSSPAHFNNGRSSPDDSFSSPIGNTLSSPGDASQRRRRRRSSTPSAFATPPPQRSRLASDATPTPSRSRQRGNGRRASSTPLAATPTSTDDVPMSSEGGEGYDMDDMRPTFVWGTNISVEDVNEAIQRFLRHFRAHSSQSDDLFTEGKYERAIKDVIEIEGESLDVNARDVFDYDPDLYTKMVRYPLEVLAIFDLVLMNMVSRINPLFEKHIQTRIFNLKTSTSMRNLNPSDIERMISLKGMVIRCSSIIPEIREAIFRCLVCGYCSDPVAVERGRISEPTKCLREECQAKNSMTLVHNRCRFTDKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDAAKPGDRVEVTGIYRAMTVRVGPTQRTVKSLFKTYIDCLHIKKTDNSRMLSEDAMEVENGMGRNAEEIVFDEEKVAQLNELSKQPDIYERLTKSLAPNIWELDDVKKGLLCQLFGGSALKLNSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVSKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHVVSLHFENPESLEQDVMDISTLTAYVSYARKHIHPQLSDEAAEELTRGYVEIRKRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSNWVEKRDVMEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRESLLQATRNIIMEKMQIGGPSMRLSELLEELKKQSNTGSEVQLTDLRNAVSTLAGEGFVALHGDSVKRS 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02225 838 ProSitePatterns MCM family signature. 536 544 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bva14g02225 838 SMART mcm 224 741 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bva14g02225 838 Gene3D - 119 222 - -
Bva14g02225 838 Pfam MCM P-loop domain 415 637 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva14g02225 838 Gene3D - 746 826 IPR036388 -
Bva14g02225 838 Pfam MCM N-terminal domain 127 236 IPR027925 -
Bva14g02225 838 PRINTS Mini-chromosome maintenance (MCM) protein family signature 556 569 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva14g02225 838 PRINTS Mini-chromosome maintenance (MCM) protein family signature 580 592 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva14g02225 838 PRINTS Mini-chromosome maintenance (MCM) protein family signature 607 615 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva14g02225 838 PRINTS Mini-chromosome maintenance (MCM) protein family signature 468 483 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva14g02225 838 PRINTS Mini-chromosome maintenance (MCM) protein family signature 528 542 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva14g02225 838 Pfam MCM OB domain 228 357 IPR033762 -
Bva14g02225 838 PANTHER DNA REPLICATION LICENSING FACTOR MCM4 81 837 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva14g02225 838 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 81 837 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bva14g02225 838 Gene3D - 228 367 IPR012340 -
Bva14g02225 838 Pfam MCM AAA-lid domain 653 739 IPR041562 -
Bva14g02225 838 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 301 313 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva14g02225 838 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 589 606 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva14g02225 838 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 250 263 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva14g02225 838 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 741 750 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva14g02225 838 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 443 454 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva14g02225 838 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 753 IPR027417 -
Bva14g02225 838 SMART AAA_5 469 619 IPR003593 -
Bva14g02225 838 SUPERFAMILY Nucleic acid-binding proteins 142 378 IPR012340 -
Bva14g02225 838 Gene3D - 255 307 - -
Bva14g02225 838 ProSiteProfiles MCM family domain profile. 427 633 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva14g02225 838 MobiDBLite consensus disorder prediction 1 108 - -
Bva14g02225 838 MobiDBLite consensus disorder prediction 1 34 - -
Bva14g02225 838 MobiDBLite consensus disorder prediction 46 97 - -
Bva14g02225 838 Gene3D - 411 745 IPR027417 -
Bva14g02225 838 CDD MCM4 430 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02225 Bva-Chr14 18734132 18739699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02225 1 837 Core DNA Replication Machinery Family AT2G16440 75.915 0.0 1290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02225 K02212 - qsu:112027052 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02225 14 18734132 18739699 Bva14g02225 14 18734132 18739699 ECH