Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02212 ATGGAGGAGGATGAGATTCAAGCACAACCATATAAATTCCCAAGACttggaaatggaagaaatgaCTCTAACAAGATAGGCTCTAAAGGGAACAATGAGCACTACccagatgatgaagaagatggaGAGCTTAGAAGACGAGGTGGAGGCAGTGATGGAAGCACAAATCGATTCCATTGGCACCATTCTTCAAGAATCATTAGGGTTTCAAGAGCATCTGGGGGGAAAGATAGGCACAGCAAGGTCATGACTTCGAAGGGTTTAAGAGACAGAAGGGTTAGGCTCTCAGTGACTACAGCTATTCAGTTCTATGACCTTCAAGATCGACTTGGTTATGACCAACCCAGTAAAGCTGTGGAGTGGTTGATTAAAGCAGCTGCAGATTCCATTGCGGAGCTTCCTTCTCTGAATAATACCTTCCCAGATACCCCAAAGCAACCAAGTGATGAAAAAAGGACAAATGCTGGAACGGAACAAGGCTTTGATTCAGCAGAAGCTGAGCTAGATGTTGAGGGGAATTACCAGCAGAATCAAAGCCAGAACCTTTCCTTGTCCAAATCTGCTTGTAGCAGCACCTCAGAGACAAGCAAAGGTTCTGGCTTGTCCCTCTCAAGGTCTGAAATTCGTGTGAACCGTAACAAGGCTCGTGAGAGGGCAAAGGTGAGAGtaaaggagaaggagaaagagaacgATTCTCGCATTGCCCATCACCAAAATGTGAATCCCATTTCTCAAACTGCTTCTTTTACTGAGCTTTTAACTGGTGGGATTGGCAATGTTGCTACAACCACTACAAGCCCAACTGGTCCAGCTCATCAGAATCACCATGAAGAGGctaattttttcaacaaaggAGGAAGACAGCAATGGCCTACAACAGTTCCAATGGACTATTTCAACTCGGGGCTTCTAGGACCTTCTTCTTCCAGATCCCACCATCATCAATCTTCATCTTCTGCCTTCTCAGGGCTAATCCAATTAGGAAACTCTTCTTTTCCCCATACAATGTCGGTTTCACCGTTCAATGTCACAGGTGAAAACCACTCCGATCAGCTGCAGCATTTCTCCTTCAACCCTGAGCATCTTATGCCAGTGGTTGCTTCTCAACCCAGCGGGAGCGACTACAATCTCAACTTCACCATCTCAACTTCAGGCCTTGCTGGCTACCACAGGGGGACCCTTCAGTCCAATTCTCCGTCGCTTTTGCCTCACCTACAGAGGTTTTCACCTATAGACGGAAACAATGTACCTTTCTTCATAGgagctgctgctgctgcagcTACAGCTGCTCCCACCATGGAGAATCACCATCAACATCAGTTCTCACCTGGATTTGATGGCCGCTTGCAACTCTGCTACAGCGACGGAAGCCGGCATTCAGAACACAAGGGCAAAGGAAAGAACTG 1406 0.436 MEEDEIQAQPYKFPRLGNGRNDSNKIGSKGNNEHYPDDEEDGELRRRGGGSDGSTNRFHWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADSIAELPSLNNTFPDTPKQPSDEKRTNAGTEQGFDSAEAELDVEGNYQQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRNKARERAKVRVKEKEKENDSRIAHHQNVNPISQTASFTELLTGGIGNVATTTTSPTGPAHQNHHEEANFFNKGGRQQWPTTVPMDYFNSGLLGPSSSRSHHHQSSSSAFSGLIQLGNSSFPHTMSVSPFNVTGENHSDQLQHFSFNPEHLMPVVASQPSGSDYNLNFTISTSGLAGYHRGTLQSNSPSLLPHLQRFSPIDGNNVPFFIGAAAAAATAAPTMENHHQHQFSPGFDGRLQLCYSDGSRHSEHKGKGKN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02212 468 MobiDBLite consensus disorder prediction 209 235 - -
Bva14g02212 468 MobiDBLite consensus disorder prediction 134 156 - -
Bva14g02212 468 Pfam TCP family transcription factor 74 229 IPR017887 -
Bva14g02212 468 ProSiteProfiles TCP domain profile. 75 133 IPR017887 -
Bva14g02212 468 PANTHER TRANSCRIPTION FACTOR TCP24 1 468 - -
Bva14g02212 468 MobiDBLite consensus disorder prediction 1 63 - -
Bva14g02212 468 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 468 IPR005333 GO:0003700
Bva14g02212 468 MobiDBLite consensus disorder prediction 174 236 - -
Bva14g02212 468 MobiDBLite consensus disorder prediction 31 52 - -
Bva14g02212 468 MobiDBLite consensus disorder prediction 174 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02212 Bva-Chr14 18473125 18484350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02212 60 468 TCP Transcription Factor Family AT4G18390 43.836 2.04e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva14g02212 TCP 1.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02212 - - jre:109011061 543.888