Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02173 ATGGTAGGACATATCGATAACAAGAGccttctctctccctctctctctctctctctctctctctcttcccatCGCCAAACCATGCCTTCTGCAGGAGCCGTAGCTCTACACTCttcactttgtttttcttgtcaGAAACCATCATCTCATTCAATTTCCCAGCAGCCAAACACCCATGTAGGTGACAAACCCAGAAGCCTTCTCCAAAAGCACCCGCTTTATTCAGCAACTCATTCAAGACTCTCCTTTCAATTCAAAGAGAAAATCCTCTGCCTCGAGATAATGGGCGTTGATGCGGGCAAGGCAATGTCCCAAAATCCTGAGCTACGCACAGCCACCATGGAATCAATTGAATCCATAATCTCTTTCCTTCAATCCAAAGGCATCCACCAGAAGGACTTGGCAAGGATTTTTGGCATGTGCCCCAAAATTCTCACCTCAAACATCAAAACTGAGCTCAACCCagtttttgattttctctCACAAGACCTCAAGGTTCCTGATCAAAGCTTTAGGAAGGTGATTAATAAGTGCCCAAGATTGCTTACTTCCAGTGTGAGAGATCAGCTTAAGCCagctttgttttttcttcagaGACTTGGGTTCATGGATTTAGCAGCCTTGGCTTATCAAGATCCAATCTTGTTAGTTTCTAATGTGGAAAACACCTTAATACCTAAGCTGCAGTATTTGGAGAATTTGGGGTTATCAAAGAATGAGGCTAGAGGCATGGTGTTGAGGTGTCCTTCTTTGTTCACTTTCAGCattgagaataattttaagcTAAAGTTTGAGTATTTTTCTGGGGAAATGGGGAGAAAATTGGAGGAGCTCAAGGAGTTCCCTCAGTACTTTGCTTTTAGTTTGGAGAACAGGATAAAGCCAAGGCACATGGAGGTTGTCCAAAGTGGCATCAATAATTTACCTTTGTCTGTAATGCTTAAAAGCACTGATGAAGAGTTCAGGGAGCTGATAAACTCTAATGTGGGAAGATG 995 0.3839 MVGHIDNKSLLSPSLSLSLSLSSHRQTMPSAGAVALHSSLCFSCQKPSSHSISQQPNTHVGDKPRSLLQKHPLYSATHSRLSFQFKEKILCLEIMGVDAGKAMSQNPELRTATMESIESIISFLQSKGIHQKDLARIFGMCPKILTSNIKTELNPVFDFLSQDLKVPDQSFRKVINKCPRLLTSSVRDQLKPALFFLQRLGFMDLAALAYQDPILLVSNVENTLIPKLQYLENLGLSKNEARGMVLRCPSLFTFSIENNFKLKFEYFSGEMGRKLEELKEFPQYFAFSLENRIKPRHMEVVQSGINNLPLSVMLKSTDEEFRELINSNVGR 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02173 331 Gene3D Transcription termination factor 3, mitochondrial 152 327 IPR038538 -
Bva14g02173 331 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Bva14g02173 331 SMART mt_12 135 167 IPR003690 GO:0003690|GO:0006355
Bva14g02173 331 SMART mt_12 100 130 IPR003690 GO:0003690|GO:0006355
Bva14g02173 331 SMART mt_12 242 274 IPR003690 GO:0003690|GO:0006355
Bva14g02173 331 SMART mt_12 172 203 IPR003690 GO:0003690|GO:0006355
Bva14g02173 331 SMART mt_12 206 237 IPR003690 GO:0003690|GO:0006355
Bva14g02173 331 Pfam mTERF 93 202 IPR003690 GO:0003690|GO:0006355
Bva14g02173 331 Pfam mTERF 213 321 IPR003690 GO:0003690|GO:0006355
Bva14g02173 331 PANTHER CGI-12 PROTEIN-RELATED 38 326 IPR003690 GO:0003690|GO:0006355
Bva14g02173 331 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 38 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02173 Bva-Chr14 17802730 17803725 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva14g02173 mTERF 3.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02173 K15032 - gmx:100788221 452.981