Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02166 ATGGCTAATGTCAGCGACAACTCTCCCATGGCCGCCATCCAGAGCGAGCCACCTAAGACGGCAGTCCTAGTCTTAGAGCAGAATCCGAACGTCGATGGCGCCACAGCTGATGTGGTGGAAGTAGATGCTGTTGGAAACGAGCTAGCCATTGTACCTGTATCGGAGACCAATGGTTCGGAGCAGGTTCAGATTGGGCAGAAGAGACGTGGCAGACCTAAGAAGTACGATGGTGATGGCAATATTGTGTCGTTCGAGAATTTTGCCAAGAAAAGAAGGGGCCGGCCACGGGGTTCCGGCAGATTGCAAACGCTGGCTTCTATAGGTGGCTTTTCTGCTGAGACAGCCGCGAGAAGCTTTATCCCTTATGTTTTGACAATAGCAACAGGGGAGGATGTTGTAAGCAGGATAGTATCATTCTCTCATCAGAGAGCCACTCACTCAGTCAGCATGATCTCAGCCACTGGTGCTGTATCGAGTGTGGGAATTGCCCTCTCTTCTGGGGTTACTTTGAATTATGAGGGCCGTTTTGagatattgtatttttctgGATCATTTACATATGGTGGCATCGGTGGTGCACACTACAGAAAGGGCACTTTAAGCGTTTCATTGGCTAAACCAGATGGGAATGTGTTTGGTGGCTGCCTTCAGGGCCCAATGATAGCAGCTACTCCCATTCAACTTGTTGTCGCCTCTTTCAAGCAATACCTGGTTAAGCAAATAAGAAGGAAGTGCGTAGGTGAAGGTTCTACTACTCGTGAGCAGCAAGCAGTTAATCCAGACGCGACCACGCGGCCAAATGGTTCGGAAGGAGAGGCTGAAATAGTGGAAGATGGACAAACATGGGCATCGCCAACATCTGGACTCATGCCAACAACAAGAACTGCTATCAACGGTGTAGCAGATGATGATGTGACCCCCGCAAGCTTAAACCAGAATATGCACCCCCCTGCTGATACCTTAAACGGTGCTGCTCTGGAAATTTTGGATGGCAACCCCCTGAACCCCATTAGTATAGATCATTA 1025 0.4878 MANVSDNSPMAAIQSEPPKTAVLVLEQNPNVDGATADVVEVDAVGNELAIVPVSETNGSEQVQIGQKRRGRPKKYDGDGNIVSFENFAKKRRGRPRGSGRLQTLASIGGFSAETAARSFIPYVLTIATGEDVVSRIVSFSHQRATHSVSMISATGAVSSVGIALSSGVTLNYEGRFEILYFSGSFTYGGIGGAHYRKGTLSVSLAKPDGNVFGGCLQGPMIAATPIQLVVASFKQYLVKQIRRKCVGEGSTTREQQAVNPDATTRPNGSEGEAEIVEDGQTWASPTSGLMPTTRTAINGVADDDVTPASLNQNMHPPADTLNGAALEILDGNPLNPISIDH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02166 341 PANTHER DUF296 DOMAIN PROTEIN 51 312 - -
Bva14g02166 341 MobiDBLite consensus disorder prediction 248 273 - -
Bva14g02166 341 MobiDBLite consensus disorder prediction 250 266 - -
Bva14g02166 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 51 312 IPR039605 GO:0003680
Bva14g02166 341 ProSiteProfiles PPC domain profile profile. 116 254 IPR005175 -
Bva14g02166 341 SUPERFAMILY AF0104/ALDC/Ptd012-like 117 241 - -
Bva14g02166 341 CDD DUF296 121 233 IPR005175 -
Bva14g02166 341 Pfam Plants and Prokaryotes Conserved (PCC) domain 121 234 IPR005175 -
Bva14g02166 341 Gene3D - 121 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02166 Bva-Chr14 17651828 17654082 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02166 66 233 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 39.779 4.52e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02166 - - mesc:110627148 197.208