LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva14g02130	ATGAGTTCAAGAAGATCCGATCCAGCAGACAGACCTACAATGCCAGCTGTAGTTCTTATGCTAGGAAGCGAAACAACGACCCTTCCCAACCCCAGAAAGTATGAATTTTCTGTTGGAAGAGTTGTTTTAGAACAAGATTCTTCATCCAACAATGCTGTACATCAGTCTGTAGTCAATGAACTAAGAAACATTAAGACCTCTAATCTCTTGCACACAAATCTCAAAGAAACTATTGTTGCACTGCTCAAGCACAATAACAACACCAGCATGTACCACCAATTTCCAATTACCCTAACCTTTCTATACCTTCTTTGCTTAGCTGCAACCCAAAACACAAGCTACTCACAAGAACAAGAAGCATTAGAATATCGTTTCGCTTGTTTGGACCAATCATCTGTTCCTCCCTCTAGCACATACCGAAACAATCTCAACAATCTCATGACCTTCCTGTCATCTGATGCAGCTAAAAGCAATGGTTTTGGTAACACAACTTCAGGAACTGATCAGAGCAATAACACAGTTTATGGTCTCTACTTTTGCCGGGGCGACGCAAACACAAGCCTTTGCCATTCATGTGTGCAAAACTCTAGCAGATTGATCAAGCACCACTGTCCCAATAATGCATCAGCTGCTTTATGGTACCCTTTTTGCCTTCTGAGGTACTCAAACCAAAATTTCTTTGGCAAACTCACCATTACACCGAGGATTCCTATGTTCGACGCAGCACATAATTTCACTAGTGCTGGAGAATTTGATAGTGATGCAAGGATTTTGATGAATGGATTGATACAAACCGCCGCGGAGAGACCCTTGATGTTCTGGACACATGGGTTTAACATAAATGGGACTCAAAAGAGGTATGGGTGGGTTCAATGCAGCAGAGATATTACTAGTGAGCAATGCAGAACATGTTTGAGCAATATGCTTGCAGATGTTGAAAATTGCTGTGAGGAGAAGAAGGTGTGGCGTATCTTTTCTCCTAGCTGTATTGTCATGTATGAGATTGAACCTTTCTTGTTGGGTAACACATTGCCTGAAGTACCAGCTCCTCAACCGGATTTTGCAGCCAAAAAGGAAagtaacaaaaggaaaagaattataatcATGAGTGTTGTAAGTGGAGTAGTAGCAGCTGCTCTACTGGCTATCAGCATTTACTACTTCTGGTGCTTGCAAAGGAGAAAAGGCAAACAAATTCTGCAGGAAGAAGGGACAAATCcgttttctaaaattaaaaagcagATTGAGGGGGAGGACTCGGTGCACGGTGATCCCCCAACGATGCCTCTGAGTACCATCCTACAAGCTACTGGTAATTTTTCCGATGAGCACAAATTGGGACAAGGTGGATTTGGTCCTGTTTATAAGGGTGTTTTACCAGATAGAAGGCAAATTGCTGTTAAAAGGCTCTCAAAAACTTCAGGTCAAGGTTTGGAGGAACTCAAAAATGAAGTAATCTTGATTGCTAAATTGCAACATAGGAACCTTGTGAGACTATTGGCATGTTGCATTGAGCAAAATGAGAAGTTGCTTGTATATGAGTACATGCCAAATTCCAGTCTTGATTTTCACCTATTTGACACAGAAAAGTGTAAGCAATTGGATTGGAAATTTCGATTAAGTATCATCAATGGAATTGCAAAGGGGCTTCTGTATCTTCACGAGGACTCACGGCTTAGGGTGATTCATAGAGATTTAAAagcaagtaatattttattagattatgacatgaatccaagaatttcagaCTTTGGATTGGCAAGAACTTTTGGAGGAGATCAGAAACAAGCAAACACATTGCGAGTAGTAGGAACATATAGATACATGGCTCCAGAATATGCTATGGAAGGCTTGTTTTCAGTGAAATCTGATGTTTTTAGTTTCGGTGTTCTTTTGCTTGAAATAATTAGTGGGAAGAGGAATAGTGGATTCTATCGTACAGAACCAGGTCTTAGTCTTCTTATTTATGCTTGGAAGCTCTGGTGTGAAGGCAAAAGCTTAGAATTAATGGACCCTTTACTAGAAAATCCATGTTCAACTGATGAAGTTCTGAAATGTATACAGATTGGCTTATTATGTGTTCAAGAAGATCCAGCAGACAGACCAACAATGTCAATTGTAGTTCTTATGCTAGGAAGCCAAACAATGACCCTCCCCAAGCCCAGACAGCCTGCATTTTCTGTTGGAAGAGTTGTTTCAGAACAAGAATCTTCATCAAACAATGCTGTACTTCATGAGTCCATCAATGAATTAACCCTTTCTGAAGTTACAGCAAGGTG	2279	0.3927	MSSRRSDPADRPTMPAVVLMLGSETTTLPNPRKYEFSVGRVVLEQDSSSNNAVHQSVVNELRNIKTSNLLHTNLKETIVALLKHNNNTSMYHQFPITLTFLYLLCLAATQNTSYSQEQEALEYRFACLDQSSVPPSSTYRNNLNNLMTFLSSDAAKSNGFGNTTSGTDQSNNTVYGLYFCRGDANTSLCHSCVQNSSRLIKHHCPNNASAALWYPFCLLRYSNQNFFGKLTITPRIPMFDAAHNFTSAGEFDSDARILMNGLIQTAAERPLMFWTHGFNINGTQKRYGWVQCSRDITSEQCRTCLSNMLADVENCCEEKKVWRIFSPSCIVMYEIEPFLLGNTLPEVPAPQPDFAAKKESNKRKRIIIMSVVSGVVAAALLAISIYYFWCLQRRKGKQILQEEGTNPFSKIKKQIEGEDSVHGDPPTMPLSTILQATGNFSDEHKLGQGGFGPVYKGVLPDRRQIAVKRLSKTSGQGLEELKNEVILIAKLQHRNLVRLLACCIEQNEKLLVYEYMPNSSLDFHLFDTEKCKQLDWKFRLSIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDYDMNPRISDFGLARTFGGDQKQANTLRVVGTYRYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGKRNSGFYRTEPGLSLLIYAWKLWCEGKSLELMDPLLENPCSTDEVLKCIQIGLLCVQEDPADRPTMSIVVLMLGSQTMTLPKPRQPAFSVGRVVSEQESSSNNAVLHESINELTLSEVTAR	759

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva14g02130	759	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	6	53	-	-
	Bva14g02130	759	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	120	756	-	-
	Bva14g02130	759	Gene3D	-	121	226	IPR038408	-
	Bva14g02130	759	Gene3D	-	238	338	IPR038408	-
	Bva14g02130	759	CDD	STKc_IRAK	446	711	-	-
	Bva14g02130	759	ProSiteProfiles	Gnk2-homologous domain profile.	233	338	IPR002902	-
	Bva14g02130	759	Gene3D	Phosphorylase Kinase; domain 1	405	515	-	-
	Bva14g02130	759	SUPERFAMILY	Protein kinase-like (PK-like)	423	726	IPR011009	-
	Bva14g02130	759	Pfam	Domain of unknown function (DUF3403)	713	759	IPR021820	GO:0004674
	Bva14g02130	759	ProSiteProfiles	Gnk2-homologous domain profile.	121	226	IPR002902	-
	Bva14g02130	759	SMART	serkin_6	440	687	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bva14g02130	759	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE KINASE	6	53	-	-
	Bva14g02130	759	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE KINASE	120	756	-	-
	Bva14g02130	759	ProSiteProfiles	Protein kinase domain profile.	440	726	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bva14g02130	759	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	561	573	IPR008271	GO:0004672\|GO:0006468
	Bva14g02130	759	Gene3D	Transferase(Phosphotransferase) domain 1	516	721	-	-
	Bva14g02130	759	Pfam	Protein tyrosine and serine/threonine kinase	443	708	IPR001245	GO:0004672\|GO:0006468
	Bva14g02130	759	Pfam	Salt stress response/antifungal	132	224	IPR002902	-
	Bva14g02130	759	Pfam	Salt stress response/antifungal	243	334	IPR002902	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva14g02130	Bva-Chr14	15282000	15287352	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva14g02130	100	726	Receptor kinase-like Gene Family	AT4G05200	40.845	7.38e-167	496

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bva14g02130		PK_Tyr_Ser-Thr	6.1e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva14g02130	-		-	gmx:100798691	966.837