Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02123 ATGGAGGTGATTTTGGCATCTTCTTCTGTTGATGGTGGTATTGGGTGTTGGGAGCTTGAGACAGGAACTGAGCACCTCCGCTACAAGTCTTGTGCATCTCCACCTCATGGTCTTGTTTGTGTGGGACACCGTTTCCTTGCGTCCTCTCAGCTTCGTGACTCTTCACTCTCCTCGGGCTTCCTTCTCTATTGGTCCTGCTCTAAGCCTCAAGTACAAGTTAAGAGCTTTCCTGCTGAACCAATTAAGCCGCTTGCTGCTAATCACCCAGGCACCTATATAGCTGGCGGAGGTTTATCGGGTCACATATACTTTTGGGAGGTTGAAAGTGGCAGATTACTGAAGAAGTGGCATGCTCATTATAGGTCTGTTACTTGCCTGGTCTTCAATGAAGATGACTCATTGTTGATATCTGGTTCAGAAGATGGATCTGTACGAGTTTGGAACCTGTTCATGATATTTGATGATTTAAGAACTCGTGAAGCAAATCATCTTTATGAGCATAGTTTTTCAGAACATACCATGCAAGTGACTGATGTTTCAATTGGTTATGGAGGATGTAATGCAATCATAGTGTCAGCTTCAGAGGATCGGACTTGTAAGGTATGGAGCTTATCTAGAGGAAAGCTACTGAGAAATGTAGTATTCCCTTCAATAATTGATGTTATTGCATTGGATCCAGCTGAACAATTCTTTTATGCTGGCAGTAGAGATGGGAAAATATTCATTTCTGCCCTTAATGCTGAAAGTGTCTCTAAAAGCGAATATGGAATGCATATTGTTGATTCCTTCTCCAACCACAGCAAGGCTGTGACTAGCTTAGCATATGCCCCAAGTGGAAATTTGTTAATATCTGGATCGGAGGATGGAACAATTCGTGTGTGGAATGCAAAAACTCATAACATTGTCCGCATGTTTAAACATGGAAAagGTCCTGTAAACAATATTCTTGTGGTTAGACAACAACCTGACTTGAGTAATCAAATATCTCTTAATTTACGAACTTGCTCAAGAAAGCAGGGATCTTTATTACCCCCGCCATTAGAAAAATATCCAAATTCAGCAGATGAAGAGCCAGATGCTAAGACTCTGGTCAGCCTCCAAGGTGGCATATCTACAGATGTTTCTCACCGCAGCGCTGATCTGATTTTTAATCAGATTAAGGAACTTCAGGGTTCTAGTGCTGCTACTGAAATGGAGATGGAGAAACTTAAACTCGATTACAATAGGTCGATGCAAATGGTTAACcaatggaagaaaatgtaCGAGAACTTGCATCAATTCTGTGTAAATGAGCTCTTGGATGGTGGAAAAGCTTTAACAGCAGATGAAAATGGCAACTG 1340 0.4119 MEVILASSSVDGGIGCWELETGTEHLRYKSCASPPHGLVCVGHRFLASSQLRDSSLSSGFLLYWSCSKPQVQVKSFPAEPIKPLAANHPGTYIAGGGLSGHIYFWEVESGRLLKKWHAHYRSVTCLVFNEDDSLLISGSEDGSVRVWNLFMIFDDLRTREANHLYEHSFSEHTMQVTDVSIGYGGCNAIIVSASEDRTCKVWSLSRGKLLRNVVFPSIIDVIALDPAEQFFYAGSRDGKIFISALNAESVSKSEYGMHIVDSFSNHSKAVTSLAYAPSGNLLISGSEDGTIRVWNAKTHNIVRMFKHGKGPVNNILVVRQQPDLSNQISLNLRTCSRKQGSLLPPPLEKYPNSADEEPDAKTLVSLQGGISTDVSHRSADLIFNQIKELQGSSAATEMEMEKLKLDYNRSMQMVNQWKKMYENLHQFCVNELLDGGKALTADENGN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02123 446 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 116 149 - -
Bva14g02123 446 PANTHER WD-REPEAT PROTEIN 18 1 432 IPR045227 -
Bva14g02123 446 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 263 298 - -
Bva14g02123 446 Coils Coil 386 406 - -
Bva14g02123 446 ProSiteProfiles Trp-Asp (WD) repeats profile. 116 149 IPR001680 GO:0005515
Bva14g02123 446 ProSiteProfiles Trp-Asp (WD) repeats profile. 263 304 IPR001680 GO:0005515
Bva14g02123 446 ProSiteProfiles Trp-Asp (WD) repeats profile. 169 212 IPR001680 GO:0005515
Bva14g02123 446 SMART WD40_4 256 295 IPR001680 GO:0005515
Bva14g02123 446 SMART WD40_4 162 203 IPR001680 GO:0005515
Bva14g02123 446 SMART WD40_4 109 148 IPR001680 GO:0005515
Bva14g02123 446 SMART WD40_4 206 244 IPR001680 GO:0005515
Bva14g02123 446 SMART WD40_4 69 106 IPR001680 GO:0005515
Bva14g02123 446 PANTHER WD REPEAT-CONTAINING PROTEIN 18 1 432 - -
Bva14g02123 446 Gene3D - 2 156 IPR015943 GO:0005515
Bva14g02123 446 ProSitePatterns Trp-Asp (WD) repeats signature. 135 149 IPR019775 -
Bva14g02123 446 Pfam WD domain, G-beta repeat 167 203 IPR001680 GO:0005515
Bva14g02123 446 Pfam WD domain, G-beta repeat 111 148 IPR001680 GO:0005515
Bva14g02123 446 Pfam WD domain, G-beta repeat 260 295 IPR001680 GO:0005515
Bva14g02123 446 Gene3D - 157 426 IPR015943 GO:0005515
Bva14g02123 446 ProSitePatterns Trp-Asp (WD) repeats signature. 282 296 IPR019775 -
Bva14g02123 446 PRINTS G protein beta WD-40 repeat signature 282 296 IPR020472 -
Bva14g02123 446 PRINTS G protein beta WD-40 repeat signature 135 149 IPR020472 -
Bva14g02123 446 PRINTS G protein beta WD-40 repeat signature 190 204 IPR020472 -
Bva14g02123 446 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 5 312 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02123 Bva-Chr14 15169511 15176783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02123 88 305 U-box Gene Family AT1G04510 25.455 9.60e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02123 K14829 - gmx:100791195 658.677