Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02106 ATGAGAATGGCAGAGTTGAAATTTGATGCAGAATCTCACACCAAAGAGGATTTATTTTCTAGGGACAACTCAAAAAGTGACGGTACACTTGCTGGTGCAGGCAGCCCCCCAAATCCAAAGGTTTCATGCAGATGGGATCCAGGTGAACCATGCAGACCTGAGATTGATGAAGCACCTGTGTTTTATCCGAGCCTTGAGGAGTTTGAGGACACCCTTGGGTATATAGGGAAGATACGTCCTTTGGCTGAACCCTATGGAATATGTAAGATTGTCCCTCCATCTTCTTGGACTCCTCCTTGCCTTCTTAAGGAGAAAAAGGTGTGGGAAGGATCGCTATTTCCTACTCGTATTCAGCAAATTGACTTGCTTCAAAATAGGGAGCccatgagaaagaaaataaggggCAGAAAacgtaaaagaagaaagaactcAAGAACCAGTTCATGTAGGAGACATCTCAATTCAGTTTCAGAAGCTGATGCCGCATCTGATGATAAATTTGGATTCCAAACAGGACCAAACTTCACTCTTGgacaatttgaaaattatgcaaaattttttaaggaatGTTACTTTAGAATGGAGGATGGTAAAGAGGAAATAACAATTAGCAATAATAATCACCAGAAGAGATGGGAGCCCTCAGTGGAGGACATTGAAGGGGAGTACTGGCGAATAATTGAGCAATCAACGGATGAGGTTGAGGTATATTATGGTGCGGACTTGGAAGCTAAAGCCCTTGGAAGTGGTTTTCCTAAGGCTGATCCCTTAACTAAGGATAGTTTAGATCAGTATACCTTGTCTGGTTGGAATCTAAATAACTTCCCCAGGCTTCTGGGTTCTGTCCTTGCATTTGAGGAAAGTGATATATCAGGCGTTCTAGTACCATGGCTTTATGTTGGGATGTGTTTTGCATCATTTTGCTGGCATGTTGAGGATCATCACCTCTATTCACTTAATTATCTGCACTTTGGTGATCCAAAAGTATGGTATGGAGTACCTGGAAAGTTCGCTTCTGCTTTGGAATATGTGATGAGAAAGCATTTACCTGATTTATTTGAGGAACAACCTAATTTACTGAATGAGCTAGTGACTCAACTATCTCCTTCAATTCTAAAATCTGAGGGAGTCCCTGTATATCGTACTGTGCAGCATTCTCGGGAATTTGTTATTACCTTTCCAAGGGCATACCATGCTGGATTCAATTGTGGTTTTAACTGTGCAGAGGCAGTGAATGTGGCCCCTGTTGATTGGTTAGTGCATGGCCAGAATGCTGTTGAGCTTTACAGTAAGCAGTGCCGGAAGACATCGTTGTCACATGACAAGTTACTCTTTGGTTCAGCTCTGGAAACTGTCAGGGCCCTCGGGGAACTAGTCCTCCTTCAAAAGCAAACtccagaaaatttgaaatggaaAAGTGTCTCTGGGAAAGATGGAGTACTTACCGAGGCAATTAAGACAAGGATAAGGATGGAAGAAGAGAGGTTGAATCGTCTTCCAAATCATTTGAAGTTGCTAAAGatggagagaaaatttgatgaCCAAACAGATAGAGAATGCTTCTCTTGCTTCTATGACTTGCACATATCTGCAACAGGTTGTGAATGCTCTCCTAATAGATTTTCTTGCCTCAAACACTTGAAGTTGTTTTGTTCATGTGGAATGGACAAAAGGTTTATCCTGCTTCGTTATACTATAGATGAGCTAAATAAATTGGTTGATGCATTAGAAGGAGAAGTAGAAGCTATTGAAGTTTGGGTAAATATAATCTCTGCGACGGTTGCTGCTGATGCTGAGGATGCTTCCAAAGAAAAGCTAGATGAGGAGAGAGACGTATGTAAAACCAATAGCCATGAAGGTGAAAGTTCATCTTGTTGTGCAGGAACGAAGgagaagttaaatttaaatcctaGCAGTTCACATAGTCATGTTTCTTCAGAGTTAGTCCAGTCAGACTTTCAGCATGGAACTTTCATTGCATCATGCAACACCATAGATAGTCATGATCGTGATATTAACCATAAAAATTTGGTCATGAATGATGAAGTTAAGATGGAGCAGACAAATTTTATGGATTTAAACCTTCATATTGCACCTGTTGAATATGAAGCCTCGTTGCACAATGCTGACAACCATAAATATCTGGGTGTGCCAGATGTCTATTCTGATGTCCCCAAGGAACAAGACAACATGCAACTTGATGCTGATATAAATACAAGAGACCCGATTCCTCTTCCAAATAAAGATGATCCTTCATGTTCAAGGGATACTCAGAGTTCACGTGCATTAGCTGGTGGAAAGTTATTTGGGGTTAACCTGCAACGGCATATAGATTTGGAATTGTTCGCTAACATTGCATCTAATATGGAAGTTGTAGACACATCCAACACAAGTGTAACAATGACAGACCAAAGCTATCTCCTAATGCAAAATTTTGGCACTTCTGTTGAGCCTATAAATTTGGGTTCTGTTGTGTATGGAAAGCTGTGGTGCAGTAAGCACGCAATATATCCAAAAGGGTACAAGAGCCGTGTTAAATTCTTCAGCATTCTTGATCCTTCAAAGATCTGTAATTATATTTCTGAAGTCCTTGATGCTGGATTTCTAGGGCCTCTTTTCAAGGTTAGTATGGAAGAACAACCTAGCGTGGCTTACACAAATGTCTCTATAGAGAAGTGCTGGGAATTGGTTCTGGAGGGAGTAAATAATGAAATCGAAAAGCGAAGGAGTCGAGGGGAACCGGAACCAACTCCCTTGCAGCCTCTGAAAAGCATTCATGGTCTTAAAATGTTTGGATTCCTTTCTCCATCTATTGTCAAGGCTATCGAATCTCAGGATCCGAAATGTCAATGCTCAGAGTATTGGAATCACAGGGAAGGAGGCTCTGTGTCTGCTGGAAGTGCCAGTGGTGTGGACAAGTTCACAGATGGTTCTAGTAGTGCTTCTTTAAGTGACCTCACTACCAAAGATTTCGGCGTCAATTCGATAAAGCCAGATGGAGACAATCTGCTTAGCGAAGGAACTCGTCATTCATTCCAAGGGATGAAAGCAATCTTACAAGGGTTTCTGAAAAAGGCAAGCCCTGATGAGTTAAGCACAATGCATGACTTATTCATCTCCAATATGCAGAATGTGCAGTGCAGAGAGATGTTCTTGAAGCTGATTGAGGAGATGCAGAAAAATCTGTA 3188 0.3993 MRMAELKFDAESHTKEDLFSRDNSKSDGTLAGAGSPPNPKVSCRWDPGEPCRPEIDEAPVFYPSLEEFEDTLGYIGKIRPLAEPYGICKIVPPSSWTPPCLLKEKKVWEGSLFPTRIQQIDLLQNREPMRKKIRGRKRKRRKNSRTSSCRRHLNSVSEADAASDDKFGFQTGPNFTLGQFENYAKFFKECYFRMEDGKEEITISNNNHQKRWEPSVEDIEGEYWRIIEQSTDEVEVYYGADLEAKALGSGFPKADPLTKDSLDQYTLSGWNLNNFPRLLGSVLAFEESDISGVLVPWLYVGMCFASFCWHVEDHHLYSLNYLHFGDPKVWYGVPGKFASALEYVMRKHLPDLFEEQPNLLNELVTQLSPSILKSEGVPVYRTVQHSREFVITFPRAYHAGFNCGFNCAEAVNVAPVDWLVHGQNAVELYSKQCRKTSLSHDKLLFGSALETVRALGELVLLQKQTPENLKWKSVSGKDGVLTEAIKTRIRMEEERLNRLPNHLKLLKMERKFDDQTDRECFSCFYDLHISATGCECSPNRFSCLKHLKLFCSCGMDKRFILLRYTIDELNKLVDALEGEVEAIEVWVNIISATVAADAEDASKEKLDEERDVCKTNSHEGESSSCCAGTKEKLNLNPSSSHSHVSSELVQSDFQHGTFIASCNTIDSHDRDINHKNLVMNDEVKMEQTNFMDLNLHIAPVEYEASLHNADNHKYLGVPDVYSDVPKEQDNMQLDADINTRDPIPLPNKDDPSCSRDTQSSRALAGGKLFGVNLQRHIDLELFANIASNMEVVDTSNTSVTMTDQSYLLMQNFGTSVEPINLGSVVYGKLWCSKHAIYPKGYKSRVKFFSILDPSKICNYISEVLDAGFLGPLFKVSMEEQPSVAYTNVSIEKCWELVLEGVNNEIEKRRSRGEPEPTPLQPLKSIHGLKMFGFLSPSIVKAIESQDPKCQCSEYWNHREGGSVSAGSASGVDKFTDGSSSASLSDLTTKDFGVNSIKPDGDNLLSEGTRHSFQGMKAILQGFLKKASPDELSTMHDLFISNMQNVQCREMFLKLIEEMQKNL 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02106 1062 MobiDBLite consensus disorder prediction 127 157 - -
Bva14g02106 1062 Pfam F/Y rich C-terminus 870 958 IPR003889 GO:0005634
Bva14g02106 1062 SMART JmjN_1 57 98 IPR003349 -
Bva14g02106 1062 Pfam JmjC domain, hydroxylase 297 413 IPR003347 -
Bva14g02106 1062 ProSiteProfiles FYR domain FYRN motif profile. 808 866 IPR003888 GO:0005634
Bva14g02106 1062 ProSiteProfiles FYR domain FYRC motif profile. 868 959 IPR003889 GO:0005634
Bva14g02106 1062 SMART cupin_9 264 430 IPR003347 -
Bva14g02106 1062 Pfam jmjN domain 59 92 IPR003349 -
Bva14g02106 1062 PANTHER LYSINE-SPECIFIC DEMETHYLASE 13 1061 - -
Bva14g02106 1062 MobiDBLite consensus disorder prediction 130 148 - -
Bva14g02106 1062 Pfam C5HC2 zinc finger 520 572 IPR004198 -
Bva14g02106 1062 MobiDBLite consensus disorder prediction 1 23 - -
Bva14g02106 1062 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 13 1061 - -
Bva14g02106 1062 MobiDBLite consensus disorder prediction 735 759 - -
Bva14g02106 1062 Gene3D Cupin 43 414 - -
Bva14g02106 1062 SMART fyrc_3 872 962 IPR003889 GO:0005634
Bva14g02106 1062 Pfam F/Y-rich N-terminus 819 863 IPR003888 GO:0005634
Bva14g02106 1062 ProSiteProfiles JmjC domain profile. 264 430 IPR003347 -
Bva14g02106 1062 Gene3D - 813 951 - -
Bva14g02106 1062 SMART fyrn_3 822 866 IPR003888 GO:0005634
Bva14g02106 1062 MobiDBLite consensus disorder prediction 1 44 - -
Bva14g02106 1062 SUPERFAMILY Clavaminate synthase-like 269 447 - -
Bva14g02106 1062 ProSiteProfiles JmjN domain profile. 58 99 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02106 Bva-Chr14 14854066 14863871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02106 784 994 JUMONJI Transcription Factor Family AT1G30810 45.972 1.02e-49 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bva14g02106 JmjC 1.3e-43 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g02106 - - gmx:100784581 1301.58