Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g02072 ATGTCTGTGGTGTCCAAGAATGCCTCGACCTCAGAGTCACACTCCACCATTCTGGAACCACCAAAAACCAATTACCCAACTGCCGAATTGCAGAATCTTGGGGCTGCCACCCGGCTGGATGGCAAAAACTATCTCCAGTGGGCACGATTAGTGACACTGGCTCTTAAGGGGAAACAGAAACTCCACCATCTTACTGAAGACCCACCCAATAGCCTAGATGAGAAGTACTCGGCCTGGGACATTGAGGACACCATCATTATGACCTGCACCTCCAATGCTGACTCAGCCCTCATTGCTGAACAAAGGGACCACCGAGGGTCCAATACTGATTCAGTCTTGACTGCTGCAAGAAGGGACAACCGAGGGTCCAAATCAGACTCCACCAAAGCTTACAACCGTGATAATTTGTGGTGCACTCATTGCAAAAAACCCAGACACACACGAGAGAACTGTTTCAAATTACATGGCAAGGAACAAGTCTTGAACCGAATCAAACAACAACGCACACAAGCAAACCTCGCAAGGGGAGAACAACCAGCATCTCCTGGAAATACTGCCATTCCATCCCTTAATGAAGCAGAGGTTGAGAAACTGCGAGCTTTCCTTGAAACCTTGACTACTAGCTCATGCTCTCTTGCTCAGTTAGGTAAGTGTCTAAATTCTGATACTTTTAAGGCTTCTGAATCAGTCCCAGGATCATGGATTATAGACTCTGGGGCAACTGACCACATGACCAATTCCAcccatttttttcaaaaatataaacctgCTTCCAGCACTAAATTTATACATGTAGCTAATGGTACACCTATTCGGGTAGCAAGGGAAGTCCCAATTGAGTCATTCCAGTCATTCCCATTTGACAATGATCACATTTCTGGTTCTGGAACTCCAGCAGATACAAATGAACCTGCTCCAGAACCTAAAGAACCACTCAAAGTGTACTCAAGGAGACATAAGTCCAAGTCTACTCAGCAGCATGTCCAATCATCGAATCCAACTCCTACTAGAACCCACAATGAACCAGTATTGTGGTCCCTTTTGGATTtcaagaccaaaatagaagtTCAGAGCACGTCTCGTGAAGTGAAGCGCCTGGATTCCATTACCAGATCTCCAATTTATGCACAGTTTGGAGAAGCACTGAATGGTTTGTCAAGTATTCGTGCTTACAAAGCATATGACAGGATGGCCAACATTAATGGAAAATTCATGGATAAAAATATCAGATTCAATCTTGTGAATATTAGTTCAAATCGTTGGCTCACCATAAGGTTGGAAAGCTTAGGAGGCTTCATGATTTGGTGGATAGCAACGTTTGCAGTCTTGCAGAATGGAAGAGCTAAAAATCAGGCAGTGTTTGCATCTACAATGGGTCTGCTTCTCAGTTATACTTTGAACATCACAAATCTGTTGAGTGGTGTCCTCAGACAAGCAAGTAGAGCTGAAAACAGCTTGAATGCCGTTGAGCGTGTTGACACATACATAGAGTTAGAAACTGAGACTCAAGCCATAAATGAGATAAACCGCCCGCCGCCTGGATGGCCATCATCTGGCTCAATTGAATTTAAGGACGTTGTTCTACGTTACCGGCCTGAACTTCCTCCTGTCTTACATGGACTGTCCTTAACAGTCTCTCCAAGTGAGAAGGTAGGGGTAGTTGGAAGGACAGGTGCAGGAAAATCTAGCATGTTTAATGCATTATTTCGAATCGTAGAGCTACAAAGTGGAAGAATCATCATTGATGGGTGTGATATTTCCAAGTTTGGGTTGCCAGATTTACGGAAAGTGCTTACTATCATACCACAAGCTCCTGTACTTTTCTCTGgaACTGTTCGATTTAATCTTGATCCTTTTAATGAACACAATGATGCTGACCTCTGGGAGGCTTTAGAAAGGGCACATTTGAAGGATGTGATAACCAGAAATCCCTTTGGCCTAGATGCTGagGTTTCAGAGGGAGGAGAAAATTTCAGTGTTGGACAGAGGCAACTGTTAAGTCTAGCTAGAGCCTTGCTGCGAAGATCAAAGATCCTTGTTCTCGACGAAGCTACTGCAGCTGTTGATGTAAGAACTGATGCCCTTATACAGAAAACTATTCGACAAGAATTCAAGTCCTGCACGATGCTCATCATTGCACATAGACTAAATACAATAATTGACTGCAATCAGATTCTCGTGCTTGATGCTGGCAAGGTTCTTGAATACAGTACGCCAGAGGAACTCTTACTAAATGAAGGAAGTGCATTCTACAAGATGGTTCAAAGTACTGGAGCTGCAAATGCTCAGTACTTATGCAGCCTAgtatttgaaaggaaaatgaagaattcTAGTGACGAAAACAGGGAACTCGAAACCCAGATGAGATTGTTAGCTTCTAACCATTGGGCCACTGCTACTCAGCTTGCCCTAGCTGTCACGCTCTCTTCGTCACACCATCACCTTCAAATGTCAGTCACCGACTGCGATAAGGATATTCTTGATAAAACCAAGGATGCAGTGATAACACTGCAAGAAGTTTTACAGGGGAGACATGATGAAGCTATAGAAGAGACATTAACCAAATACCACATTCCTACAAATAGGTGGTGGTCTACTCTCTACAAAGTAGTTGAAGGTCTTGCTTTCATGAACAGGTTGTCAGTCAATGGCcttcaaaatttagaatatgaTTTTGAAGAGAGGTCCTTAGACTG 2696 0.4247 MSVVSKNASTSESHSTILEPPKTNYPTAELQNLGAATRLDGKNYLQWARLVTLALKGKQKLHHLTEDPPNSLDEKYSAWDIEDTIIMTCTSNADSALIAEQRDHRGSNTDSVLTAARRDNRGSKSDSTKAYNRDNLWCTHCKKPRHTRENCFKLHGKEQVLNRIKQQRTQANLARGEQPASPGNTAIPSLNEAEVEKLRAFLETLTTSSCSLAQLGKCLNSDTFKASESVPGSWIIDSGATDHMTNSTHFFQKYKPASSTKFIHVANGTPIRVAREVPIESFQSFPFDNDHISGSGTPADTNEPAPEPKEPLKVYSRRHKSKSTQQHVQSSNPTPTRTHNEPVLWSLLDFKTKIEVQSTSREVKRLDSITRSPIYAQFGEALNGLSSIRAYKAYDRMANINGKFMDKNIRFNLVNISSNRWLTIRLESLGGFMIWWIATFAVLQNGRAKNQAVFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVDTYIELETETQAINEINRPPPGWPSSGSIEFKDVVLRYRPELPPVLHGLSLTVSPSEKVGVVGRTGAGKSSMFNALFRIVELQSGRIIIDGCDISKFGLPDLRKVLTIIPQAPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVITRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIRQEFKSCTMLIIAHRLNTIIDCNQILVLDAGKVLEYSTPEELLLNEGSAFYKMVQSTGAANAQYLCSLVFERKMKNSSDENRELETQMRLLASNHWATATQLALAVTLSSSHHHLQMSVTDCDKDILDKTKDAVITLQEVLQGRHDEAIEETLTKYHIPTNRWWSTLYKVVEGLAFMNRLSVNGLQNLEYDFEERSLD 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g02072 898 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 356 484 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva14g02072 898 MobiDBLite consensus disorder prediction 100 128 - -
Bva14g02072 898 MobiDBLite consensus disorder prediction 288 340 - -
Bva14g02072 898 PANTHER ABC TRANSPORTER C FAMILY MEMBER 11-RELATED 354 776 - -
Bva14g02072 898 Gene3D - 504 757 IPR027417 -
Bva14g02072 898 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 354 776 - -
Bva14g02072 898 MobiDBLite consensus disorder prediction 1 24 - -
Bva14g02072 898 SUPERFAMILY ABC transporter transmembrane region 357 501 IPR036640 GO:0005524|GO:0016021
Bva14g02072 898 MobiDBLite consensus disorder prediction 325 340 - -
Bva14g02072 898 CDD ABCC_MRP_domain2 519 739 - -
Bva14g02072 898 Pfam ABC transporter 538 686 IPR003439 GO:0005524
Bva14g02072 898 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 521 755 IPR003439 GO:0005524
Bva14g02072 898 SMART AAA_5 547 726 IPR003593 -
Bva14g02072 898 Gene3D ABC transporter type 1, transmembrane domain 355 503 IPR036640 GO:0005524|GO:0016021
Bva14g02072 898 ProSitePatterns ABC transporters family signature. 658 672 IPR017871 GO:0005524
Bva14g02072 898 Coils Coil 774 794 - -
Bva14g02072 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 513 755 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g02072 Bva-Chr14 13621393 13633115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g02072 518 761 Calmodulin-binding Proteins AT2G36910 33.600 4.98e-32 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g02072 14 13621393 13633115 Bva14g02072 14 13621393 13633115 ECH