Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01999 ATGAATGGACAATCACAAACACATACCAAGACCCTGGGTACACTTGGCTACATTGCACCAGAGTTTGGATCCAAAGGGATTATTTCTACAAAAGTAGATGTGTATAGCTTTGGGATTATGTTGATGGAAAttttcacaagaaaaaaaccaGACGATGACATGTTTGTTGAAGGATTGAGCTTGAAAAGTTGGATCAGTGGCTCATTTCCCCATGCAATAATTCAAGTTATGGATTCCAATTTGCTAAACGGACAAGAAAGGAACAGTCTCCATGATATAGTGAAGACTACATCGTCGATTTTTGAATTAGCCTTGAGTTGCTGTGCAGATTTACCTGAAGGACGAATCAGTATGATTGATGCTGCTGCATCGTTAAACAGAATCAAGGTTGCGTTTATGCAGATGCCAAGGCAAAATGTATTGAAATA 428 0.3738 MNGQSQTHTKTLGTLGYIAPEFGSKGIISTKVDVYSFGIMLMEIFTRKKPDDDMFVEGLSLKSWISGSFPHAIIQVMDSNLLNGQERNSLHDIVKTTSSIFELALSCCADLPEGRISMIDAAASLNRIKVAFMQMPRQNVLK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01999 142 ProSiteProfiles Protein kinase domain profile. 1 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01999 142 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 3 134 - -
Bva14g01999 142 Gene3D Transferase(Phosphotransferase) domain 1 1 139 - -
Bva14g01999 142 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 134 - -
Bva14g01999 142 Pfam Protein kinase domain 5 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01999 142 SUPERFAMILY Protein kinase-like (PK-like) 4 135 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01999 Bva-Chr14 12538203 12554680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01999 13 137 Receptor kinase-like Gene Family AT3G47570 34.400 2.41e-21 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva14g01999 Pkinase 4.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01999 - K13420 gmx:100784397 179.489