Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01963 ATGGTCAGGACCGCCTCTAGTGGCGACCTCGTGGACATGATTGTTGCGCTTTCTCGCGCGGACCACGAGATTGATCACGTTGGAGTTACTTTTGTCTCCGGTTTCGCCTACAccGACGGGTACCATGGAAACCCCTACCTTTCTAATGGCTGCAAAGATGTTGATGAATGTAGAACGATCAAGCCGTGCAATATGACATGCCACAACTTTGATGGCGGTTATAATTGCTCTTGTCCACATGGATATGAAGGAGACGGAAAGAAACATGGATCTGGCTGCTTTTTAAAGGAGAAACCTAAGCAAGATCCTGTCGTTGTCATAGCACTTGGCATCAGCATAGccttcttgtttcttcttattttgacCTTATTGTTATGTTGGGCACACAAGCAAAGAACACTTACGCGACTTAGGGCAAAATGGTTTGAGCAAAATGGAGGGTTTCTACTACTAGAACGACTTTCTGAATTGCAAAGACAATATTATGAAAGAATCAAGATATTTAAAGAAGTTGAACTTATGAAGGCCACAAACAACTTCCACAAAAGCCAAATCCTTGGACATGGAGGACAGGGGGTAGTTTACAAGGGTATATtaccaaataatcaaatagTTGCGATCAAGAAGTCGAGAATGGGAGGAGCAGATTGGAGACAAGTTAAAGATTTTATCAATGAAATGGTTGTGCTTTCCCAAATCAACAATAGGAATGTAGTGAAATTGTTGGGGTGTTGCCTAGAAACAGAAGCTCCCATATTAGTCTATGAGTTTGTGTCCAATGGAGACCTCTCTGAACGTATTGACCCATCAAAGAATGCAACTCCACTTCCTTGGGAGAAAAGGTTAAGCATAGCTGCAGAAATTGCTGAGGCTGTTTCGTATTTGCACTCAATTGCTTCTATTCCAATAATCCACAGGGATATAAAATCTAGCAACATACTTTTAGACAATAATGACAAAGTGAAAGTGTCTGATTTTGGAGCTTCAAGGTTGGTACCTCTTGATGAAACTCATGTTTCTACTATTGTGCAAGGCACTCTCAGATATTTGGACCCGGAGTATCTCCAGACAGGTCAATTGAATGAAAAGAGTGATGTTTATGGTTTTGGAGTGGTGCTTATTGAGTTACTCACCGcTTA 1139 0.4012 MVRTASSGDLVDMIVALSRADHEIDHVGVTFVSGFAYTDGYHGNPYLSNGCKDVDECRTIKPCNMTCHNFDGGYNCSCPHGYEGDGKKHGSGCFLKEKPKQDPVVVIALGISIAFLFLLILTLLLCWAHKQRTLTRLRAKWFEQNGGFLLLERLSELQRQYYERIKIFKEVELMKATNNFHKSQILGHGGQGVVYKGILPNNQIVAIKKSRMGGADWRQVKDFINEMVVLSQINNRNVVKLLGCCLETEAPILVYEFVSNGDLSERIDPSKNATPLPWEKRLSIAAEIAEAVSYLHSIASIPIIHRDIKSSNILLDNNDKVKVSDFGASRLVPLDETHVSTIVQGTLRYLDPEYLQTGQLNEKSDVYGFGVVLIELLTA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01963 379 SUPERFAMILY Protein kinase-like (PK-like) 158 378 IPR011009 -
Bva14g01963 379 SMART serkin_6 180 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01963 379 Pfam Protein kinase domain 180 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01963 379 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 39 378 - -
Bva14g01963 379 SUPERFAMILY EGF/Laminin 53 88 - -
Bva14g01963 379 ProSiteProfiles EGF-like domain profile. 53 85 IPR000742 -
Bva14g01963 379 CDD EGF_CA 53 85 - -
Bva14g01963 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Bva14g01963 379 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 39 378 IPR045274 GO:0007166
Bva14g01963 379 SMART egfca_6 53 94 IPR001881 GO:0005509
Bva14g01963 379 Gene3D Phosphorylase Kinase; domain 1 151 257 - -
Bva14g01963 379 ProSiteProfiles Protein kinase domain profile. 180 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01963 379 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 67 78 IPR000152 -
Bva14g01963 379 Gene3D Laminin 33 88 - -
Bva14g01963 379 Pfam Calcium-binding EGF domain 53 88 IPR001881 GO:0005509
Bva14g01963 379 Gene3D Transferase(Phosphotransferase) domain 1 258 379 - -
Bva14g01963 379 ProSitePatterns Calcium-binding EGF-like domain signature. 53 76 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01963 Bva-Chr14 12158455 12167004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01963 40 379 Receptor kinase-like Gene Family AT1G21230 53.353 7.77e-116 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bva14g01963 Pkinase 9.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01963 - - tcc:18592452 400.979