Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01959 ATGGTTGTGAATTGGACTATTGCCAATGAAAGTTGTGATCAAGCTAAGAAAAACACGTCTGCATATGCTTGCAAGGAAAACAGCATCTGCCTTGGCTTTGAATCAGGCTATAGGTGCTCTTGTAAGGATGGGTTCCAACGGAACCCTTACCTTCCTGGTGGATGCCAAGATGTTGATGAATGTAGAACGATCAAGCCGTGCAATATGACATGCTACAATTTTGATGGCGGTTATAATTGCTCTTGTCCACATGGATATGAAGGAGACGGAAAGAAAGATGGATCTGGCTGCTTTTTTAAGGAGAAACCTAAGGAAGATCCTGTCGTTGTCATAGCACTTGGCATCAGCATAGCCTTgttgtttcttcttattttgacATTATCGTTATGTTGGGTACACAAGGAAAGAACACTTAGACAACTTAGGGCAAAATGGTTTGAGCAAAATGGAGGGTTTCTGCTACTAGAACGACTTTCTGAACTACAAAGACAATATTATGAAAGAATCAAGATATTTAAAGAAGTTGAGCTTATGATAGCCACAAACAACTTCCACAGAAGCCGAATCCTTGGACGTGGAGGACAAGGGGTAGTTTACAAGGGTATATtaccaaataatcaaatagTTGCCATCAAGAAATCGAGAATGGGAGGAGCAGATTGGAGCCGAGTTCAAGATTTTATCAATGAAATGGTTGTGCTTTCCCAAATCAACAATAGGAATGTGGTGAAACTCTTGGGGTGTTGCCTAGAAACAGAAGCTCCCATATTAGTCTATGAGTTTGTGTCCAATGGCAACCTCTCTGATCGTATTGACCCATCAAAAAATGCAACCCCACTTCCTTGGGAGAAAAGGTTAAGCATAGCTGCAGAAACTGCTGAGGCTGTTTCGTATTTGCACTCAGTTGCTTCTATTCCAATAATCCACCGAGATATAAAATCTAGCAACATACTTTTAGACAACAATGACAAAGTGAAAGTGTCTGATTTTGGAGCTTCAAGGCTGGTACCTCTTGATGAAACTCATGTTTCCACTATTGTGCAAGGCACTCCGGGATACTTGGACCCAGAATACCTTCAAACAAGTCAATTGAATGAAAAGagtgatgtttatagttttggagttGTGCTTATTGAGCTGCTCACTGGTGAGAAAGCAAGTCAGTTCTTTGGGAAGAGTGATTCTTTGGTTATGCACTTTGTGTCATCAATGAAGGAAGACCGTTTGATGGAAATTCTTGACACACGAGTAGTGAATCAGAGTAATATAAAGCAGGTTAAGGAAGTTGCCTCATCGGCAAGGAAGTGTGTGAGAGTTTCAGGAGAGGAAAGGCCAACCATGACTGAAGTAGCAGTGGAACTGAAAGGTCTCATTGCCATGCAGAAGCATTCATCGTTCAATGAAGAGGTGAaaccagaagaaaaagaatatttatttagttatatgGCGAGCTCATATGGTGGAGATGGTACCGGTACTAGCATTTCTGCTCCTTATGGTAACAcacaaaaccaaatgtcattTGAACTTGAGGATGGTCGATG 1544 0.3899 MVVNWTIANESCDQAKKNTSAYACKENSICLGFESGYRCSCKDGFQRNPYLPGGCQDVDECRTIKPCNMTCYNFDGGYNCSCPHGYEGDGKKDGSGCFFKEKPKEDPVVVIALGISIALLFLLILTLSLCWVHKERTLRQLRAKWFEQNGGFLLLERLSELQRQYYERIKIFKEVELMIATNNFHRSRILGRGGQGVVYKGILPNNQIVAIKKSRMGGADWSRVQDFINEMVVLSQINNRNVVKLLGCCLETEAPILVYEFVSNGNLSDRIDPSKNATPLPWEKRLSIAAETAEAVSYLHSVASIPIIHRDIKSSNILLDNNDKVKVSDFGASRLVPLDETHVSTIVQGTPGYLDPEYLQTSQLNEKSDVYSFGVVLIELLTGEKASQFFGKSDSLVMHFVSSMKEDRLMEILDTRVVNQSNIKQVKEVASSARKCVRVSGEERPTMTEVAVELKGLIAMQKHSSFNEEVKPEEKEYLFSYMASSYGGDGTGTSISAPYGNTQNQMSFELEDGR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01959 514 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 2 493 - -
Bva14g01959 514 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 71 82 IPR000152 -
Bva14g01959 514 CDD EGF_CA 57 89 - -
Bva14g01959 514 Gene3D Phosphorylase Kinase; domain 1 155 261 - -
Bva14g01959 514 SMART serkin_6 184 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01959 514 SMART egfca_6 57 98 IPR001881 GO:0005509
Bva14g01959 514 SMART egfca_6 12 56 IPR001881 GO:0005509
Bva14g01959 514 Gene3D Laminin 61 98 - -
Bva14g01959 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Bva14g01959 514 SMART egf_5 11 56 IPR000742 -
Bva14g01959 514 SMART egf_5 60 98 IPR000742 -
Bva14g01959 514 Gene3D Laminin 10 60 - -
Bva14g01959 514 Gene3D Transferase(Phosphotransferase) domain 1 262 480 - -
Bva14g01959 514 ProSiteProfiles EGF-like domain profile. 57 89 IPR000742 -
Bva14g01959 514 SUPERFAMILY Protein kinase-like (PK-like) 165 457 IPR011009 -
Bva14g01959 514 CDD STKc_IRAK 190 457 - -
Bva14g01959 514 SUPERFAMILY EGF/Laminin 57 90 - -
Bva14g01959 514 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 493 IPR045274 GO:0007166
Bva14g01959 514 Pfam Calcium-binding EGF domain 57 94 IPR001881 GO:0005509
Bva14g01959 514 ProSiteProfiles Protein kinase domain profile. 184 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01959 514 Pfam Protein kinase domain 184 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01959 514 ProSitePatterns Calcium-binding EGF-like domain signature. 57 80 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01959 Bva-Chr14 12057467 12061070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01959 1 514 Receptor kinase-like Gene Family AT1G21230 48.295 1.73e-151 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bva14g01959 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01959 - - tcc:18592452 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01959 14 12057467 12061070 Bva14g01959 14 12057467 12061070 ECH