Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01954 ATGGGTTTGAGTAGAATGTCTATGCCACTCTCGTTGCTGGACGGGTACCATGGAAACCCCTACCTTTCTAATGGCTGCAAAGATGTTGATGAATGTAGAACGATCAAGCCGTGCAATATGACATGCCACAACTTTGATGGCGGTTATAATTGCTCTTGTCCACACGGATATGAAGGAGACGGAAAGAAAGATGGATCTGGCTGCTTTTTAAAGGAGAAACCTAAGGAAGATCCTGTCGTTGTCATAGCACTTGGTATCAGCATAGCCGTgttgtttcttcttattttgacCTTATTGTTATGTTGGGTACACAAGCAAAGAACACTTAGACAACTTAGGGCAAAATGGTTTGGGCAAAATGGAGGGTTTCTACTACTAGAACGACTTTCTAAACTGCAAAGACAATATTATGAAAGAATCAAGATATTTAAAGAAGTGGAGCTTATGAAGGCCACAAACAACTTCCACAGAAGCCAAATCCTTGGACGTGGAGGACAAGGGGTAGTTTACAAGGGTATATtaccaaataatcaaatagTTGCCATTAAGAAGTCGAGAATGGGAGGAGCAGATTGGAGACAAGTTAAAGATTTTATCAATGAACTGGTTGTGCTTTCCCAAATCAACAATAGGAATGTGGTGAAACTTTTGGGGTGCTGCCTAGAAACAGAAGCTCCCATATTAGTCTATGAGTTTGTGTCCAATGGCAACCTCTCTGATCGTATTGACCCGTCAAAGAATGCAACTCCACTTCCTTGGGAGAAAAGGTTAAGCATAGCTGTAGAAACTGCTGAGGCTGTTTCGTATCTGCACTCAGTTGCTTCTGTTCCAATAATCCACAGAGATATAAAATGTAGCAACATACTTTTAGACAACAATGACAAAGCGAAAGTGTCTGATTTTGGAGCTTCAAGGTTGGTACCTCTTGATGAAACTCATGTTTCCACTATTGTGCAAGGCACTCCCGGATATTTGGACCCAGAGTATCTCCAGACAGGTCAATTGAATGAAAAGAGTGATGTCTATAGTTTTGGAGTTGTGCTTATCGAGTTACTCACCGTGTCCATGAAAGTGTTGTGGAATGGAGCTAAGATAGAAGAGTTCAAGCCTGGGAGAGGAGTTAGACAAGGTGATCCGATATCCCCTTATATCTTTGTCATGTGCATGGACAAACGACATGTCACACTTAATTGCAGAGAGGGTGGAGGAAGGGAGCTGGAAACCAATGCGAGGAGGGAGGAATG 1244 0.4132 MGLSRMSMPLSLLDGYHGNPYLSNGCKDVDECRTIKPCNMTCHNFDGGYNCSCPHGYEGDGKKDGSGCFLKEKPKEDPVVVIALGISIAVLFLLILTLLLCWVHKQRTLRQLRAKWFGQNGGFLLLERLSKLQRQYYERIKIFKEVELMKATNNFHRSQILGRGGQGVVYKGILPNNQIVAIKKSRMGGADWRQVKDFINELVVLSQINNRNVVKLLGCCLETEAPILVYEFVSNGNLSDRIDPSKNATPLPWEKRLSIAVETAEAVSYLHSVASVPIIHRDIKCSNILLDNNDKAKVSDFGASRLVPLDETHVSTIVQGTPGYLDPEYLQTGQLNEKSDVYSFGVVLIELLTVSMKVLWNGAKIEEFKPGRGVRQGDPISPYIFVMCMDKRHVTLNCREGGGRELETNARREE 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01954 414 Gene3D Laminin 7 63 - -
Bva14g01954 414 CDD EGF_CA 28 60 - -
Bva14g01954 414 SUPERFAMILY EGF/Laminin 28 61 - -
Bva14g01954 414 SUPERFAMILY Protein kinase-like (PK-like) 137 366 IPR011009 -
Bva14g01954 414 ProSiteProfiles EGF-like domain profile. 28 60 IPR000742 -
Bva14g01954 414 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 42 53 IPR000152 -
Bva14g01954 414 Gene3D Phosphorylase Kinase; domain 1 126 232 - -
Bva14g01954 414 SMART serkin_6 155 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01954 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Bva14g01954 414 ProSitePatterns Calcium-binding EGF-like domain signature. 28 51 IPR018097 GO:0005509
Bva14g01954 414 Gene3D Transferase(Phosphotransferase) domain 1 233 376 - -
Bva14g01954 414 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 13 356 IPR045274 GO:0007166
Bva14g01954 414 Pfam Calcium-binding EGF domain 28 65 IPR001881 GO:0005509
Bva14g01954 414 Pfam Protein kinase domain 155 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01954 414 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 13 356 - -
Bva14g01954 414 SMART egfca_6 28 69 IPR001881 GO:0005509
Bva14g01954 414 ProSiteProfiles Protein kinase domain profile. 155 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01954 Bva-Chr14 12022185 12029748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01954 13 353 Receptor kinase-like Gene Family AT1G21230 53.161 2.14e-114 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bva14g01954 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01954 - - tcc:18592452 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01954 14 12022185 12029748 Bva14g01954 14 12022185 12029748 ECH