Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01949 ATGGAATGTCTGCAATCGGTCTCCATGAAAGTGTTGTGGAATGGAGCTCAGATAGAAGAGTTCAAGGCTGGGAGAGGAGTTAGACAGGGTGATCTTATACCCCCTTATATCTTTGTCACGTGCATGGACAAACTGTCACACTTAATTGCAGAGAGGGTGGGTTTAGGGTGCTGGGAACCAATGCGAGCAGGGAGGAATGATCCACTCATCTCACATCTCATGTTTGCGGATGTCTTCTGCTTTTTGCAGAAGCTAGTGAACAACATATTGATCAGGTTAAACAATGCCTTCACCTCTTCTGCAGGAGCTCAGGGCAAAAAAATCAGCAGTGAAAAGGTATCTGGGTCTTCCAGAGATTTTGAACATGAAAAGGTCCTAAAGGGGAAATATGGAAGAAATCAAGAATGGGTCTATAACATAGACGTTAGAAGCACTGATTCACACATTTGGCAAGCTGTTGGACAGATTTGGGGTAAACTAACAGGCAACCACGGGTGGACTCTAGGGAATGGAAAGAATTCTAGATTTTGGACTGAAGCTAGGCTGGGAGAAGGAGGAACTATCATTGATAGTGTAGACTTCAGAGTGCCTGATTACTTAATGGAAGATAGAGTTGCAGAGAAGTGGAGGTATGATGCTGTCTTTGAAGATTCTTTTACAAGACCTAGTAATCCTATGAGAGTGATCATTTCCTTCTCGAAGAATATCAAACAGGCTATGCAGTCTGCAGGAGGGGTAAAGCATGGAGAAGGATCTGGTACTCTCAGTTGGAGCAAACCACCAAGTCATTGGATCAAGGTCAATACAGACGGAGCTTCAAAAGGGAACCCAGATATTGACGAGTGTAGCACAATCAAGCCATGTAATAACTGGACATGCATCAATCTTGTTGGCGGTTACAATTATTCCTGTCCACCTGGATATAAAGGAGATGGCAAGAGAGATGGATCTGGCTGCGTTTTAGAGCTAAAATCTAAGAAAAATGTTGTCGTTGGCATAGCACTAGAAACTGAAGCTCCCATATTAGTTTATGAGTTTGTGCCAAACGGCCACCTTTTCGAGAGTATTGACCCAACAAAGAATGTGCCTGCTCTTCCATGGGAGACTAGGTTACTAGCTGCAGAAATAGCtgaaactattttatatttacactcTGCTGCTTCTGTTCCAATAATTTATAGAGATATAAGATCTACTAACATACTTTTGGACAACAATAACAAAGCAATAGTTTCTGATTTTGGAGCTTCAAGGTTGGTACCTCAAGATGAAACTCAAGTGTCCTCAATTGTTCAAGGCACACCAAGATACTTGGACCCTGAGTACCTCCAAACAAGTGAATTGAATGAGAAGAGTGATGTTTGTAGTTTTGGAGTGGTGCTTATTTA 1388 0.4171 MECLQSVSMKVLWNGAQIEEFKAGRGVRQGDLIPPYIFVTCMDKLSHLIAERVGLGCWEPMRAGRNDPLISHLMFADVFCFLQKLVNNILIRLNNAFTSSAGAQGKKISSEKVSGSSRDFEHEKVLKGKYGRNQEWVYNIDVRSTDSHIWQAVGQIWGKLTGNHGWTLGNGKNSRFWTEARLGEGGTIIDSVDFRVPDYLMEDRVAEKWRYDAVFEDSFTRPSNPMRVIISFSKNIKQAMQSAGGVKHGEGSGTLSWSKPPSHWIKVNTDGASKGNPDIDECSTIKPCNNWTCINLVGGYNYSCPPGYKGDGKRDGSGCVLELKSKKNVVVGIALETEAPILVYEFVPNGHLFESIDPTKNVPALPWETRLLAAEIAETILYLHSAASVPIIYRDIRSTNILLDNNNKAIVSDFGASRLVPQDETQVSSIVQGTPRYLDPEYLQTSELNEKSDVCSFGVVLI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01949 462 SUPERFAMILY EGF/Laminin 278 312 - -
Bva14g01949 462 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 274 322 - -
Bva14g01949 462 Pfam Calcium-binding EGF domain 278 314 IPR001881 GO:0005509
Bva14g01949 462 CDD EGF_CA 278 311 - -
Bva14g01949 462 Gene3D Laminin 278 321 - -
Bva14g01949 462 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 274 322 IPR045274 GO:0007166
Bva14g01949 462 SUPERFAMILY Protein kinase-like (PK-like) 332 461 IPR011009 -
Bva14g01949 462 ProSitePatterns Tyrosine protein kinases specific active-site signature. 391 403 IPR008266 GO:0004672|GO:0006468
Bva14g01949 462 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 325 462 - -
Bva14g01949 462 ProSiteProfiles Protein kinase domain profile. 232 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01949 462 SMART egfca_6 278 320 IPR001881 GO:0005509
Bva14g01949 462 Gene3D Transferase(Phosphotransferase) domain 1 323 462 - -
Bva14g01949 462 Pfam Protein kinase domain 333 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01949 462 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 325 462 IPR045274 GO:0007166
Bva14g01949 462 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 3 116 IPR000477 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01949 Bva-Chr14 11946234 11953271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01949 320 462 Receptor kinase-like Gene Family AT1G21240 56.164 6.10e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bva14g01949 Pkinase 2.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01949 - - jre:109017900 176.792