Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01894 ATGAGACTCTCTACTGCTGGTTTTAGTCCTCCACCCCAGGAAGGTGAAAAGAGAGTTCCAGATTCAGAACTTTGGCATGCATGTGCTGGTCCTCTTGTTTCTTTGCCAGCAGTTGGAAGCCGTGTTGTCTATTTTCCACAAGGTCACAGTGAACAGGTTGCTGTATCGACCAACAAGGAAGTGGATGCCCATATACCTAACTACCCAAGCTTACCTCCCCAGCTTATCTGTCAACTTCATAATGTGACAATGCATGCTGATGCTGAGACCGATGAAGTATATGCACAGATGACCTTACAACCTTTGAATCCTCAAGAGCAAAAAGAGGCATATCTTCCGGCAGAGTTGGGTACTCCTAGTAAACAGCCAACAAACTACTTCTGTAAAACTTTGACAGCCAGTGACACAAGCACTCATGGGGGATTCTCTGTTCCCCGCCGGGCAGCTGAGAAAGTGTTTCCTCCATTGGATTTCTCCCAACAACCTCCTGCTCAAGAATTAATTGCAAGGGATTTGCATGGTAATGAATGGAAATTCAGACATATCTTCCGAGGCCAGCCCAAAAGGCATCTACTTACTACAGGATGGAGTGTCTTTGTGAGCTCTAAAAGACTTGTTGCTGGTGATTCGGTGCTGTTTATCTGGAATGAAAGGAATCAATTGCTGCTTGGTATTCGACGTGCTAATCGACCACAAACAGTGATGCCTTCATCAGTGTTATCAAGTGATAGCATGCATTTGGGGCTTCTTGCTGCTGCAGCTCATGCTGCTGCAACAAACAGTCGTTTCACCATTTTCTACAACCCACGTGCTAGCCCGTCAGAATTTGTCATACCCTTAGCAAAGTATGTTAAAGCTGTGTATCATACACGGGTTTCAGTTGGCATGCGCTTCAGGATGCTGTTTGAAACAGAGGAATCAAGTGTGAGGCGATACATGGGTACAATAACTGGCATAAGTGACTTGGATCCAGTTCGGTGGCCAAATTCACATTGGCGCTCTGTCAAGGTTGGGTGGGATGAATCTACTGCAGGAGAGAGGCAGCCTAGAGTGTCCCTTTGGGAGATTGAGCCATTAACAACATTTCCAATGTATCCATCTCCATTCCCACTTAGGCTTAAACGGCCGTGGCCTCCAGGACTGCCTTCTTTCCATGGCATGAAGGATGAAGATTTGGGCATGAATTCTCCACTATTGTGGCTTCGAGACAGTACGGATAGAGGACTTCAGTCTCTTAATTTCCAGGGAATTGGGGTCAGTCCTTGGATGCAGCCAAGACTTGAACCCACCATGCTGAATTTGCAAACTGACATGTACCAAGCCATGGCAGCTGCTGCACTTCAGGATATGAGGACTTTGGATCCTTCCAAACAGCATCCTGCAGCTCTTCTTCAATTTCAGCAACCACAGAGCTTCCCCAACAGGACTGCTGCCTTAATGCAGGCCCAGATGTTGCAGCAGTCTCAACCTCAGCAGGCATTTCAAAGTAATCAAGACAATCAGCATCCATCTCTATCCCAGGCTCAAACTCAGTCACATCTTCAGCCACAACTTCAGCCACAACTTCAGCATCAGCACTCATTCAACAATCAGCATcatcagcagcagcaacaacagCAAGTGGTTGATCGTCACCAGATTTCAAGTGCTGTCTCTACAATGTCTCAATTTGTTTCAGCACCTCAACCTCAGTCACCACCTGTGCAAGCTATCGCTTCTCTCTGTCACCAGCAGAGTTTTTCTGAGTCAAATGGGAACCCTGTGACCACTGCTATTGTCTCTCCCCTGCATAGTATCTTGGGTTCCTTTCCCCAGGACGAAACATCCCAACTTCTCAACGTTTCTAGAACTAGCTCTTGGATACCTGTTCAGACTTCTACTACCTGGCCCTCCAAGCGTGTTGCAGTGGATCCTCTCCTTTCTTCTGGAGCTTCTCAAGGCATTCTACCTCAGGTGGAGCACTTGGGGCAGTCACAAAGCACCATGTCACAAAGTTCTGTCGCATTGCCCCCCTTTCCTGGCAGGGAGTGCCAAATAGACCAAGAAGGGAGCACTGATGCTCAAAACCATCTTTTATTTGGCGTCAATATAGAGCCGTCATCTCTTCTAGTACAGAATGGGATGTCAACCCTTAAGGCAGTTGGCAACAACAGTGACCACACTGCCATAGCTTTCCAATCTTCAAATTACCTGAATACTACAGGCACTGAGTCTTCATTGAATCCTGTAATGACACATAGCATTGGGGAATCGGGCTTCCTTCAGTCTCCAGAAAATGGAGGCCCAGGGAACTCTTCCAAAACCTTTGTGAAGGTTTATAAGTCAGGGTCCTTCGGACGATCATTGGATATCACTAAGTTCAGCAGCTACCCTGAGCTGCGCAGTGAACTTGCTCGTATGTTTGGCCTTGAAGGCGAGTTGGAGGACCCTATGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGATGTTCTTCTCCTCGGCGATGGCCCTTGGCCGGAATTTGTAAATAGTGTTTGGTGTATCAAGATACTTTCCCCTCAAGAAGTGCAGCAAATGGGCAACAATGGCCTTGAGCTTCTGAACTCAGTTCCAATTCAGAGGCTCTCTAATGGCATCTGTGATGACTACGTGAACCGTCAGGATCCCAGAAACTTAAGCAGTGGGATAACAACTGTGGGATCTCTAGACTATTG 2702 0.4671 MRLSTAGFSPPPQEGEKRVPDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNVTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSSKRLVAGDSVLFIWNERNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDEDLGMNSPLLWLRDSTDRGLQSLNFQGIGVSPWMQPRLEPTMLNLQTDMYQAMAAAALQDMRTLDPSKQHPAALLQFQQPQSFPNRTAALMQAQMLQQSQPQQAFQSNQDNQHPSLSQAQTQSHLQPQLQPQLQHQHSFNNQHHQQQQQQQVVDRHQISSAVSTMSQFVSAPQPQSPPVQAIASLCHQQSFSESNGNPVTTAIVSPLHSILGSFPQDETSQLLNVSRTSSWIPVQTSTTWPSKRVAVDPLLSSGASQGILPQVEHLGQSQSTMSQSSVALPPFPGRECQIDQEGSTDAQNHLLFGVNIEPSSLLVQNGMSTLKAVGNNSDHTAIAFQSSNYLNTTGTESSLNPVMTHSIGESGFLQSPENGGPGNSSKTFVKVYKSGSFGRSLDITKFSSYPELRSELARMFGLEGELEDPMRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNNGLELLNSVPIQRLSNGICDDYVNRQDPRNLSSGITTVGSLDY 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01894 900 SMART B3_2 127 229 IPR003340 GO:0003677
Bva14g01894 900 ProSiteProfiles PB1 domain profile. 767 851 IPR000270 GO:0005515
Bva14g01894 900 MobiDBLite consensus disorder prediction 1 20 - -
Bva14g01894 900 Gene3D - 125 228 IPR015300 -
Bva14g01894 900 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bva14g01894 900 Gene3D - 291 363 - -
Bva14g01894 900 SUPERFAMILY CAD & PB1 domains 765 842 - -
Bva14g01894 900 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Bva14g01894 900 PANTHER AUXIN RESPONSE FACTOR 1 880 - -
Bva14g01894 900 MobiDBLite consensus disorder prediction 482 546 - -
Bva14g01894 900 CDD B3_DNA 126 227 IPR003340 GO:0003677
Bva14g01894 900 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 880 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bva14g01894 900 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Bva14g01894 900 Gene3D - 763 856 - -
Bva14g01894 900 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01894 Bva-Chr14 11068868 11075956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01894 1 484 B3 DNA Binding Superfamily AT1G30330 85.890 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bva14g01894 AUX_IAA 5e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01894 - - gmx:100777789 1475.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01894 14 11068868 11075956 Bva14g01894 14 11068868 11075956 ECH