Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01882 ATGCCTAAGCAAATCCATGAGATTAAGGACTTCCTTCTCACTGCTCGAAGGAAGGATGCAAGGTCTGTGAAAATTAAGAGGAGCAAGGATGTTGTCAAGTTCAAGGTCCGATGCTCAAAGTACCTTTACACACTTTGTGTGTTTGATCCAGAGAAGGCTGATAAATTGAAGCAGTCACTTCCTCCAGGTTTGAGTGTGCAAGACCTGTG 209 0.4402 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01882 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Bva14g01882 69 Gene3D - 1 69 IPR038464 -
Bva14g01882 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 - -
Bva14g01882 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01882 Bva-Chr14 10984001 10985777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01882 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 95.652 4.12e-44 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01882 K02923 - sind:105158696 140.584