Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01792 ATGAGTGTAGGAGGTGGTGCCGGAGATCCAGCTCTGGCATCCTCTAACCACTATTCTTTTCTCAGAGATAACCGACCTTACCCTAACTCTGCCAACATCACAATCCAAATGACTACCTTACCCTTCTTTATCTCGTtattcatctttctttctatccTTCCTTACACAACAAGCAATCCGGTTTGTGATTCTTACCTAACCTGTGGAAATGAATCTCCTAACATTCAGTTCCCTTTCTCGATTAGAGACAGGAATCCAGGCAAACGTTGCGGGTACCCGGGATTCGAGCTTTCCTGCCACAAAGATAGGGCATTGCTCAGCATCCCAAATGCTGGAAACTTTGTTGTCACAAACATATTCTCCGACTCCGTTCTCATTGACGACACAGATGGTTGCTTCCCCAAACGTTTTCTTGATCAAAACGTAAGCCTCGAAGGTACACCATTTGAATGGGGTGAGGATTATCATCTTGTATACTTGACCTTTCTCAAATGCTCCAACTTGACAGATTGGGATCCATCAGAGCATGTGCCTTGCCTAGGAAGTAGCTATAATAATAGTGATGTTGTTCTTTTGTTCCCTAATGAACATTCTGAAATGGAGTGGAATTCATCGTGTCAAGTGATTTCTTCGGCTTGGATTCCCATGTCGTATTCGAGACGTTGGTATTTCTCGGATGATATTTACAGTGAAATTGAGTTGAAATGGAGTAAACCAGATTGCGGAATGTGTGATCCATATGAACAATGTGGGTTCGTGGGGGAGACTAGTCTCGACGTTACTTGTTACCTAAGGAATATTACTTCTCCAACTCTGAGATATGATGCAAATAAAGATTCTTCAGCGGGAAGTGCATTTGGAAAGGCTATTGGCATCGCAGTAGCAGCGATCATATGTCTCATGTTGATGCAATGTTTGGCTTGTGGTAGGTCACATAGACAGCAACCACAAGCAAGTTTAGAGCTTCCAACCTTAATTGCACCAGAACCCCCATTTTTTGCAGTTACAGCCGTGGGGCTTGATAGGTCAATCATAGAAACATACCCTAAAATTGAGGTCAGTGAAAGTGGAGCATTGCCTGATCCAAACGACAACGTTTGCTCCATATGTCTATGTGAATACCAGCCTAAGGAGACACTAAGGAGCATACCATACTGCAATCACTATTTTCACTTGAATTGCTTAGATGAGTGGCTCAAGATGAATGCCACATGCCCCTTGTGCCGAAACTTATTACCTGGGAGTTCTTTGTCTATGCTTTCAACATCATCATA 1274 0.4246 MSVGGGAGDPALASSNHYSFLRDNRPYPNSANITIQMTTLPFFISLFIFLSILPYTTSNPVCDSYLTCGNESPNIQFPFSIRDRNPGKRCGYPGFELSCHKDRALLSIPNAGNFVVTNIFSDSVLIDDTDGCFPKRFLDQNVSLEGTPFEWGEDYHLVYLTFLKCSNLTDWDPSEHVPCLGSSYNNSDVVLLFPNEHSEMEWNSSCQVISSAWIPMSYSRRWYFSDDIYSEIELKWSKPDCGMCDPYEQCGFVGETSLDVTCYLRNITSPTLRYDANKDSSAGSAFGKAIGIAVAAIICLMLMQCLACGRSHRQQPQASLELPTLIAPEPPFFAVTAVGLDRSIIETYPKIEVSESGALPDPNDNVCSICLCEYQPKETLRSIPYCNHYFHLNCLDEWLKMNATCPLCRNLLPGSSLSMLSTSS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01792 424 Pfam Ring finger domain 366 409 IPR001841 -
Bva14g01792 424 SMART ring_2 367 408 IPR001841 -
Bva14g01792 424 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 334 414 IPR013083 -
Bva14g01792 424 Pfam Wall-associated receptor kinase galacturonan-binding 62 123 IPR025287 GO:0030247
Bva14g01792 424 PANTHER RING-H2 FINGER PROTEIN ATL20-LIKE 43 416 - -
Bva14g01792 424 CDD RING-H2_PA-TM-RING 366 409 - -
Bva14g01792 424 ProSiteProfiles Zinc finger RING-type profile. 367 409 IPR001841 -
Bva14g01792 424 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 43 416 - -
Bva14g01792 424 SUPERFAMILY RING/U-box 361 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01792 Bva-Chr14 10111159 10113390 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01792 58 410 C3H Transcription Factor Family AT2G46495 31.405 1.07e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01792 - - mtr:MTR_8g099495 270.781