Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01790 ATGGTTACCTTGCCTTTCTTCGTCTCCTTATTCATCTTTATCTTCCTTCCTTGCACAATAAGCACTCTGGTTTGCGATTCTTACGAAATCTGTTCACCTTTGTCTCCTTACATTCAGTTCCCTTTCTGGTTGAGAGACAAGAATTCAGGCAAACGTTGCGGGTACCCAGGATTCGAGCTTTCCTGTGACAACGGTAGGACATTGCTCAATATCCCAAATGGTGGAAACTTTGTTGTCACAAAAATGTCCTCTGTAGATGCTTTCATTGATGACACAGATGGTTGCTTTCCCAGACGTTTTCTTGAGCAAAACGTAAGCCTCACAGGTACACCATTCAAATGGGGAGATGATTATCCTCTTCTAAACTTCACATTTCTCAAATGCTCCGACTTGTTAGATTGGTATCCATTAGAGCATGTGCCTTGCCTAAGCAGCAGCTACAGGACTGATGTTGTTGTTTTGTTCCCCGATAAAAACTACGAAAAGGAGTGGATTTCATCATGTCAATTGATTTCTTCGGCTTGGATTCCGATGTCATATTCGAGTCCTTGGTCTTTCTCGTGGGATCACTACAGTGAAATCAAGTTGAAATGGGATAAACCAGATTGCAGTAACTGTGATCCAGATTATGAACAATGTGGGTTCTCTGGGGATATTGGTACCAACGTTACTTGTTACCCAAGGTATACATCTCCGAGCAATGCTGCAAAAAATGCTGAAGACACATCTTTAAAGGATCTTGGCATCGCATTAGCAGTGTTGCTCATATTCTCCATGGTGGTGCGATGTTTTCTTAGTGCTAGGTCAGATTTTAGGAGACGTAGACAGCAACTACGAGCAATAGCGCAAGCAAGTTTAGAGCTTCCAACCTTAATTGCACTACAACCTCCAGTTGTTGCAGTTACAGCGGTGGGGCTTGATAGGTCAATCATAGAAACATACCCTAAAATTGAGGTCACTGAAAGTGGAGCATTGCCTGATCCAAACGACAACGTTTGCTCCATTTGTCTATCTGAATACCAGCCTAGGGAGACATTAAGGAACATACCATACTGCAATCATTATTTTCACTTGAATTGCTTAGATGAGTGGCTCAATGTGAATGCTACATGCCCCTTGTGCCGAAACTTATTACCTGGGAATTCTTTGTCTATGTTTTG 1160 0.4224 MVTLPFFVSLFIFIFLPCTISTLVCDSYEICSPLSPYIQFPFWLRDKNSGKRCGYPGFELSCDNGRTLLNIPNGGNFVVTKMSSVDAFIDDTDGCFPRRFLEQNVSLTGTPFKWGDDYPLLNFTFLKCSDLLDWYPLEHVPCLSSSYRTDVVVLFPDKNYEKEWISSCQLISSAWIPMSYSSPWSFSWDHYSEIKLKWDKPDCSNCDPDYEQCGFSGDIGTNVTCYPRYTSPSNAAKNAEDTSLKDLGIALAVLLIFSMVVRCFLSARSDFRRRRQQLRAIAQASLELPTLIALQPPVVAVTAVGLDRSIIETYPKIEVTESGALPDPNDNVCSICLSEYQPRETLRNIPYCNHYFHLNCLDEWLNVNATCPLCRNLLPGNSLSMF 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01790 386 ProSiteProfiles Zinc finger RING-type profile. 333 375 IPR001841 -
Bva14g01790 386 Pfam Ring finger domain 332 375 IPR001841 -
Bva14g01790 386 SMART ring_2 333 374 IPR001841 -
Bva14g01790 386 PANTHER RING-H2 FINGER PROTEIN ATL69-RELATED 3 377 - -
Bva14g01790 386 Pfam Wall-associated receptor kinase galacturonan-binding 25 83 IPR025287 GO:0030247
Bva14g01790 386 SUPERFAMILY RING/U-box 326 378 - -
Bva14g01790 386 CDD RING-H2_PA-TM-RING 332 375 - -
Bva14g01790 386 SMART ringv_2 332 375 IPR011016 GO:0008270
Bva14g01790 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 299 380 IPR013083 -
Bva14g01790 386 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 3 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01790 Bva-Chr14 10104343 10106113 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01790 37 376 C3H Transcription Factor Family AT2G46495 32.951 5.09e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01790 - - lja:Lj4g3v3004070.1 273.092