Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01684 ATGTCAACTCTTGGGAGACATGCCTCGGgtagaaagaaattaagagatCTATTGCTTCAGCAAGATAATCGCCGTTGCGCTGATTGTAATGCTCCAGACCCTAAATGGGCGTCAGCAAATATTGGAGTTTTCATATGCTTAAAATGTTGCGGTGTGCACAGAAGTCTTGGTGCTCAAGTATCAAAGGTTTTGTCTGTGGCATTGGATGACTGGTCGGAAGATGAAATAGATGCAATGGTGGAAGTGGGAGGAAATGCTTCTGCTAACTCGATTTATGAGGCATATATTCCGGAAGGACATACAAAACCTGGACCAGATGCCAGTCATGAGCAGCGTACAAAATATATCCGGTCAAAATATGAGCTTCAAGAATTTCTAAAACCTGCTTTGCGCATAGTGTCTGGCAAAAACTCTAAACAAAACTCTCTAGATTCTAGTTTGAAAAGCACTAGTGGTTCAAAGAATACgGAAGACCTGGTAGAATTTATTGGAAAGTTGAAAGTGAAAGTAATTAAAGGCACAAATTTAGCTGTCAGAGATATGATGACAAGTGATCCATATGTTGTCTTGAATCTTGGCCAGCAGACTGTTCAGACAACTGTAGTAGGGAGTAACTTGAATCCAGTCTGGAATGAGGAGTTTATGCTCTTTGTTCCTCAAGATTATGGTCCTTTGAAATTgCAAGTCTATGATCACGACACATTTTCGGCCGATGATATAATGGGAGAAGCAAACATTGATCTCCAGCCCATGATAACATCTGCAATGGCATTTGGAGATGCAGGAATGTTTAGCGATATGCAGATAGGAAAGTGGCTGAAATCCCATGACAATGCTCTCACAGATGATAGCCCAGTCAATATTGTTGATGGCAAGGTTAAACAGGAGATGCAACTCAAGCTTCAGAACGTAGAATCTGGAGAATTAGACTTAGAAATTGAGTGGATTCCTCCTCTTGAACTATA 965 0.401 MSTLGRHASGRKKLRDLLLQQDNRRCADCNAPDPKWASANIGVFICLKCCGVHRSLGAQVSKVLSVALDDWSEDEIDAMVEVGGNASANSIYEAYIPEGHTKPGPDASHEQRTKYIRSKYELQEFLKPALRIVSGKNSKQNSLDSSLKSTSGSKNTEDLVEFIGKLKVKVIKGTNLAVRDMMTSDPYVVLNLGQQTVQTTVVGSNLNPVWNEEFMLFVPQDYGPLKLQVYDHDTFSADDIMGEANIDLQPMITSAMAFGDAGMFSDMQIGKWLKSHDNALTDDSPVNIVDGKVKQEMQLKLQNVESGELDLEIEWIPPLEL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01684 321 Gene3D C2 domain 162 320 IPR035892 -
Bva14g01684 321 Pfam C2 domain 164 253 IPR000008 -
Bva14g01684 321 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 125 IPR001164 GO:0005096
Bva14g01684 321 Pfam Putative GTPase activating protein for Arf 12 127 IPR001164 GO:0005096
Bva14g01684 321 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 162 256 IPR035892 -
Bva14g01684 321 CDD ArfGap 14 120 - -
Bva14g01684 321 SMART arf_gap_3 11 133 IPR001164 GO:0005096
Bva14g01684 321 PRINTS C2 domain signature 180 192 IPR000008 -
Bva14g01684 321 PRINTS C2 domain signature 204 217 IPR000008 -
Bva14g01684 321 PRINTS C2 domain signature 225 233 IPR000008 -
Bva14g01684 321 ProSiteProfiles C2 domain profile. 144 261 IPR000008 -
Bva14g01684 321 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 4 317 IPR044518 GO:0005096|GO:0005543
Bva14g01684 321 SUPERFAMILY ArfGap/RecO-like zinc finger 11 128 IPR037278 -
Bva14g01684 321 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Bva14g01684 321 PRINTS HIV Rev interacting protein signature 63 84 IPR001164 GO:0005096
Bva14g01684 321 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Bva14g01684 321 SMART C2_3c 165 260 IPR000008 -
Bva14g01684 321 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Bva14g01684 321 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 4 317 - -
Bva14g01684 321 CDD C2_ArfGAP 163 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01684 Bva-Chr14 9257696 9263988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01684 4 317 C2H2 Transcription Factor Family AT4G21160 70.031 2.58e-175 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01684 K12486 - gmx:100810806 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01684 14 9257696 9263988 Bva14g01684 14 9257696 9263988 ECH