Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01678 ATGTATTTGTGCACTGTTCTTACATCAATGGCGGTGGTCACCATAGCATTCCCATTGTCACCAAAGTTCATCGTAGAGCTGTTCAAATTTTTGTATGAGAATGATGGAAAAGTTGAAATTGTTCTAGCAAGGATAAATCATGGGGATCTTATAGCTGTGGCAATTACCTTTCCGAATTTCCAAGCTTATGTTATCACTGTGGTTCTGAGGATCATGTTCATCATAGAATATTATGAAGCAGTAAGGAGACTACGATCGCTAGGATCCTTCATAAAGTACCAAGATACGGTTGGTTGCTTCCAGGCTGGGTTGTCGAGGAACGCCATATGGAACATGGAAGAGTTTATAGGGCTATGGATTCATAAGCCGGCCCCGGGAGCAGGAGGAAAAGATGTATTTATGCACTGTTCTTACATCAATGGCGGTGGCCACCGTAGCATTCCCATTGTGACCAAAGTTGATTATGATCGAGTTGAAACTGAAGATGGCAGAGTGCAGGCTGTTAATGTCAAAGTTCATCATAGAGCTGTTCAACAGTACGGAAAAGTTGGAAGTGCTACATTTCAGTCTGAAAcatcaaaagttaaatttgaCCTAGAGGGTGAAAATGAAGGTGTATTCGAGGCTGTTGCTGTagaata 641 0.4087 MYLCTVLTSMAVVTIAFPLSPKFIVELFKFLYENDGKVEIVLARINHGDLIAVAITFPNFQAYVITVVLRIMFIIEYYEAVRRLRSLGSFIKYQDTVGCFQAGLSRNAIWNMEEFIGLWIHKPAPGAGGKDVFMHCSYINGGGHRSIPIVTKVDYDRVETEDGRVQAVNVKVHHRAVQQYGKVGSATFQSETSKVKFDLEGENEGVFEAVAVE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01678 213 SUPERFAMILY Nucleic acid-binding proteins 126 173 IPR012340 -
Bva14g01678 213 Pfam 'Cold-shock' DNA-binding domain 127 171 IPR002059 GO:0003676
Bva14g01678 213 Gene3D - 90 172 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01678 Bva-Chr14 9181798 9186664 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CSD Bva14g01678 CSD 2.7e-06 CL0021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01678 K03704 - rbz:B9057_05130 44.2838