Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01669 ATGAAATCTATGGTCCACGAAACCAAAATTCTGAAACGCGAGCGTGGAAAAcaaggaggaggaggagaagaagaagaattgaaGTGTGTAGAAGGTCGCCTTGCAAGaTTTGGGCACAGCACAGTGCATCTGAGTTTGGAAATCATGACTTCTACTGCTCATGACCTAACTGATAACGAAGCTAATGAGCAGCAGAAGCAGTCAGAGTCACAAATtcactcttcttcttctaatgGAATCAGTCATCCTGGTATTTCTACCCAAAATGTTCAGTATGCAACACCTCCTCAGCTTGGAACTGGGCATGCTATGGCACCATCCGTTTACCCGTATCCAGATCCTTACTATAGAAGCATCTTTGCTCCCTATGAAACACAGCCTTATCCCCCACAACCATATGGTGGACAGCCAATGGTTCATCTTCAGCTCATGGGAATTCAACAAGCCGTCGTTCCTCTACCTACTGACACAGTTGAGGAGCCTGTGTTTGTCAACGCAAAACAGTATCATGGAATATTAAGACGTCGGCAGTCTCGCGCCAAAGCAgagttagaaaataaaatgatcagGAATAGGAAGCCCTATTTACATGAATCTCGACATTTGCATGCATTAAGAAGAGCAAGAGGATGTGGAGGTCGATTTCTGAATgcaaagaaagatgaaaaccAACAAAATACGGTGGCATCGACCGACGATTCACAATCCAATATCAATCTCAATTCTGATAAAAATGATCTTGCTTCATCAGATAGGACATCCTA 764 0.3874 MKSMVHETKILKRERGKQGGGGEEEELKCVEGRLARFGHSTVHLSLEIMTSTAHDLTDNEANEQQKQSESQIHSSSSNGISHPGISTQNVQYATPPQLGTGHAMAPSVYPYPDPYYRSIFAPYETQPYPPQPYGGQPMVHLQLMGIQQAVVPLPTDTVEEPVFVNAKQYHGILRRRQSRAKAELENKMIRNRKPYLHESRHLHALRRARGCGGRFLNAKKDENQQNTVASTDDSQSNINLNSDKNDLASSDRTS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01669 254 PRINTS CCAAT-binding transcription factor subunit B signature 161 183 IPR001289 GO:0003700|GO:0006355
Bva14g01669 254 PRINTS CCAAT-binding transcription factor subunit B signature 192 215 IPR001289 GO:0003700|GO:0006355
Bva14g01669 254 MobiDBLite consensus disorder prediction 1 25 - -
Bva14g01669 254 ProSitePatterns NF-YA/HAP2 subunit signature. 163 183 IPR018362 GO:0003677|GO:0016602
Bva14g01669 254 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7 49 237 - -
Bva14g01669 254 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 160 215 IPR001289 GO:0003700|GO:0006355
Bva14g01669 254 MobiDBLite consensus disorder prediction 58 98 - -
Bva14g01669 254 MobiDBLite consensus disorder prediction 219 248 - -
Bva14g01669 254 SMART cbf3 157 218 IPR001289 GO:0003700|GO:0006355
Bva14g01669 254 ProSiteProfiles NF-YA/HAP2 family profile. 158 218 IPR001289 GO:0003700|GO:0006355
Bva14g01669 254 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 49 237 IPR001289 GO:0003700|GO:0006355
Bva14g01669 254 MobiDBLite consensus disorder prediction 58 96 - -
Bva14g01669 254 MobiDBLite consensus disorder prediction 216 254 - -
Bva14g01669 254 Gene3D - 158 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01669 Bva-Chr14 9134156 9140683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01669 49 254 CCAAT-HAP2 Transcription Factor Family AT1G30500 56.522 2.00e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bva14g01669 CBFB_NFYA 7.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01669 K08064 - gmx:100809036 325.865