Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01639 ATGTTAGTCAATTTGGAAATACTTGATCTTAGTCAAAACAAATTTACCAGTTCAATTCCATCCTCTATTGGAAACTTGACAAAGCTCAAAGGATTGAGTTTCCTCACAAACAACTTCAGCCACATCATTCCGCCAGAAGTGAATAACCTCACTAATTTGATTCTTGATCTTAGTGGGAATTTGTTGACCGGAGGAATACCAACAACTCTTGGTGAGCTAAGACGTTTGGAAACTTTAAACCTCTCAAGCAATAATCTCTCGGGTGAGATTCCATCTGGTTTTGATGATATGTCAAGCTTGACTTCTGTTGACATTTCTGACAATCAATTAAGGGGTCCGCTTCCTAATAATCAAGCCTTCCATAATGCTACAATTGAAACATTGAGAAATAATAAGGGATTGTGTGCCACAGAGGAGTTTGACAATAGATACCTCATTGGGGTCGGAGGGTATGGAAATGTTTACAAGGCTATGTTATCAACAGtttatgaGTGTTTGGAAGGAGGCAGCTTGGATAAGATATTAAATCATGAGACACAAGAAGTTGCATTTGATTGGAATAGAAGAGTGAATGTTGTTAAAGATGTTGCTAATGCTTTATCATATATGCACCAGGGTTGCTCATCTCCTATAGTTCATCGAGACATTTCAAGTAAGAATATTCTTCTAAATTTGGAATATGAGGCTCACATCTCTGACTTCGGAACAGCTAAGCTTCTCAAACATGACTCAAGCAATTGGACCTTGTTTGCAGGCACTTTTGGGTATGCTGCTCCAGGTTA 782 0.3824 MLVNLEILDLSQNKFTSSIPSSIGNLTKLKGLSFLTNNFSHIIPPEVNNLTNLILDLSGNLLTGGIPTTLGELRRLETLNLSSNNLSGEIPSGFDDMSSLTSVDISDNQLRGPLPNNQAFHNATIETLRNNKGLCATEEFDNRYLIGVGGYGNVYKAMLSTVYECLEGGSLDKILNHETQEVAFDWNRRVNVVKDVANALSYMHQGCSSPIVHRDISSKNILLNLEYEAHISDFGTAKLLKHDSSNWTLFAGTFGYAAPG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01639 260 PANTHER LEUCINE RICH REPEAT KINASE 2 162 259 - -
Bva14g01639 260 PANTHER LEUCINE RICH REPEAT KINASE 2 136 160 - -
Bva14g01639 260 SUPERFAMILY Protein kinase-like (PK-like) 129 259 IPR011009 -
Bva14g01639 260 Pfam Leucine rich repeat 55 110 IPR001611 GO:0005515
Bva14g01639 260 ProSitePatterns Tyrosine protein kinases specific active-site signature. 211 223 IPR008266 GO:0004672|GO:0006468
Bva14g01639 260 Gene3D Transferase(Phosphotransferase) domain 1 158 260 - -
Bva14g01639 260 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 162 259 - -
Bva14g01639 260 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 136 160 - -
Bva14g01639 260 Pfam Leucine Rich Repeat 4 26 IPR001611 GO:0005515
Bva14g01639 260 SMART LRR_typ_2 2 26 IPR003591 -
Bva14g01639 260 SMART LRR_typ_2 97 122 IPR003591 -
Bva14g01639 260 SMART LRR_typ_2 73 96 IPR003591 -
Bva14g01639 260 Gene3D Ribonuclease Inhibitor 1 141 IPR032675 -
Bva14g01639 260 PRINTS Leucine-rich repeat signature 5 18 - -
Bva14g01639 260 PRINTS Leucine-rich repeat signature 73 86 - -
Bva14g01639 260 Pfam Protein kinase domain 161 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01639 260 ProSiteProfiles Protein kinase domain profile. 76 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01639 260 PANTHER LEUCINE RICH REPEAT KINASE 2 3 135 - -
Bva14g01639 260 SUPERFAMILY L domain-like 2 136 - -
Bva14g01639 260 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01639 Bva-Chr14 8885094 8886923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01639 136 260 Receptor kinase-like Gene Family AT4G08850 54.400 2.26e-36 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva14g01639 Pkinase 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01639 - - qsu:112011352 271.166