Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01610 ATGGCAGCTGCGATTCCGGCGACTCAGAACAAGATCCGATGGGGGGAGCTAGAGGAGGACGACGGAGAGGATCTCGACTTTTTGCTGCCCCCGCGACAGGTGATAGGTCCAGATGAGAACGGGATAAAGAAGGTGATCGAGTACAAATTCGATGAAGATGGCAATAAGGTGAAGATTACTACCACCACTCGTACTCGCAAGCTCGCTAATGCTCGCCTCAGTAAGCGTGCCCTTGAGAGGCGATCCTGGGCTAAGTTTGGTGATGCTGTTCACGAGGATGTTGGTAGCAGGCTCACCATGGTTTCCACTGAGGAAATCCTCCTCGAGCGACCTAGGGCTCCAGGTAGCAAGGCAGAGGAACCAAAGGCTGCTGGAGACCCATTGGCTCAATTCCAGAAAGGTGGTGGTGCTGTTCTCATGGTTTGTAGGACTTGTGGTAAGAAGGGTGATCACTGGACATCAAGGTGTCCTTACAAGGATCTTGCCCCACCAGCTGAAGGGTTTGTTGATAAGCCTGCTGCAGCAGAAGCTCCAACTGCTGCTCCTGGTTCCAAAGCATATGTTCCTCCTGGTTTGAGAGGAGGAGTTCAAGATAGGTCCGGCTCAGACATGCGAAGAAGGAACGACGAAAATTCTGTCCGGGTCACCAACCTCTCTGAGGATACAAGAGAGCCCGATTTGCTTGAGCTGTTCCGTCCTTTCGGTGCAGTGAGCAGAGTCTATGTTGCTGTTGATCAGAAGACTGGCATGAGCAGAGGATTTGGTTTTGTTAACTTTGTAAACAGGGAAGATGCACAGAGGGCCATTAACAAGCTCAATGGATATGGTTACGACAATCTCATCCTTAGAGTTGAATGGGCGACGCCAAGAACAAACTA 878 0.5091 MAAAIPATQNKIRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFDEDGNKVKITTTTRTRKLANARLSKRALERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKAEEPKAAGDPLAQFQKGGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPAEGFVDKPAAAEAPTAAPGSKAYVPPGLRGGVQDRSGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRTN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01610 292 Gene3D - 176 292 IPR012677 -
Bva14g01610 292 Pfam Eukaryotic translation initiation factor 3 subunit G 33 161 IPR024675 -
Bva14g01610 292 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 211 289 IPR000504 GO:0003723
Bva14g01610 292 SMART rrm1_1 212 285 IPR000504 GO:0003723
Bva14g01610 292 CDD eIF3G 40 160 IPR024675 -
Bva14g01610 292 MobiDBLite consensus disorder prediction 179 210 - -
Bva14g01610 292 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 9 292 - -
Bva14g01610 292 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 213 279 IPR000504 GO:0003723
Bva14g01610 292 SUPERFAMILY RNA-binding domain, RBD 199 291 IPR035979 GO:0003676
Bva14g01610 292 CDD RRM_eIF3G_like 212 287 IPR034240 -
Bva14g01610 292 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 9 292 - -
Bva14g01610 292 PIRSF Transl_init_eIF-3_RNA-bind 3 292 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bva14g01610 292 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 11 291 IPR017334 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01610 Bva-Chr14 8599623 8601251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01610 10 290 Eukaryotic Initiation Factors Gene Family AT3G11400 70.064 9.04e-153 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01610 K03248 - qsu:112022532 499.204