Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01608 ATGGAACGTGGTGGAAGGGGTGGAAGCGGTGGTGGAAGGGGTAGGGGAAGAGGAAGTGTGGGTGGGTGGCAAGGACGGGGAGGCGGCTACGGCGCTGATGGCGGTGGCGGTGGCGGCGGAAGAGGATCGCATCAGCAGACAGGGCAGCACCAAGGTGGGTATGGCGGACGCGGCGGTGGATATGGCGGGAGAGGTCCTGCTCAGCATCCCCAAGGTCAGCCTCAACCGCCACCAGCAGGAGCATGGGGGCGATCAAGCCCAGGTAGCGGCGGTGGATATGGCGGAAGAGGTCCTGCTCAGCATTCTCAAGTGCAGCCTCAACCGCCACCAGCAGGAGCATGGGGGCGATCAAGCCCAGGTAGCGGCGGTGCATATGGCGGAAGAGGTCCTGCTCAGCATTCCCAAGGGCAGCCTCAACCGCCACCAGCAGGAGCATGGGGGCGATCAGGCCCAGTTGGTCGTGGTGCTCCTAATCAAGGGGTTTGGGTTCCTTCCACTGAGGGTTCTAGCGGTGGCAGTTATCCtagaggaggaggaggtggaAGGGGTGGAGGTAATGTAGTTAATCCAAGTCCACCAATCAGTAACCCTGTTCCAGTTCCGGTTAGTGGGAGTTCTGAACCCAATCCAGTGGAAAAGCTCGAAGGACTGAAAATATCATCTGAAAATGTGAACAAAATTATTCCCATCAGAAGACCTGATGGGGGTGGCAGACTATCAATTCGAACTTGCAGGCTTTATGTCAACCATTTTCCTGTTGCGTTCAATCCGCAGAGCATAATAATGCATTACAATGTTGATGTTACACCAGAGTTGCCGCCAAAACATGGCCGGCCTAAGAAAATTTCTAAATCTGATCTCTCTCTGATCAGAGAGAAACTGTTTTCTGACGACTCTCAGAGATTGCCCTTGCAAATGACAGCTTATGATGGAGAGAAGAACATATTCAGTGCAGTTCCATTGCCAGAAGAAACATTCAAAGTGGTTACTTCTCGAGGAGAGGATGAGAGAACCACTACATATGTTGTTACTCTGACATTGGTCAACAAACTTGAGCTTCGTAAGTTGAAGGATTATCTTAGTGGTCATGTTCTGTCGATTCCCCGGGACATACTACAAGGGATGGATTTGGTAGTGAAGGAAAATCCAGCTCGATGCACAGTTTCGGTGGGACGAAACTTCTATTCAACAAGGGAAGCACAGGATCTTCAAGCAGGCATAGTGGCAATAAGAGGCTTTCAACATAGTCTCAAGCCTACTTCTCAGGGTCTGTCTCTGTGTCTGGACTATTCTGTGTTGGCATTCCGAAAGCAAATGTCAGTTTTGGATTTCCTCCATGAGCATAATCCAAGCTTCAACTTGAATGAAATTGGGAGGTTCAGGAAATACATGGAAGAGACGCTGGTTGGCCTGAAAGTTAACGTCACTCACCGcagaaccaaacaaaaatacattgtTGGAAGGTTAACACCGAAAAATACAAGGTACATCACTTTCCCTGTTGAAGATCCAGAGAGCAAGAGTCCACCAAAGAACATCAGTCTTCTTGATTATTTCCAAGATAAATATGGAGTGGACATTCAATACAAAGATATTCCATGTTTGGATTtgggaaaaggaaataagatgAACTATGTGCCTATGGAGCTATGCGTCTTGGTTGAGGGTCAGAGATATCCAAAGGAGCAGTTGAGTTTTCATGCTgggaaaacattaaaagacaTGTCACTCGCCTATCCGGACAACAGGATGAATACGATACGGAGGATGATGCAATCTGAAGAAGGACCTTGCGGGGGTGGCATCATTCAGAATTTTGGAATGAATGTTAATATGAACATGACAAAGGTTGAAGGACGTGTGATTGGGCCTCCAGAATTGCGATTGGGTAAGCCAAATGGTGAGATGATGAAGATACAATTGGATCCAGAAAAATGTAATTGGAATCTACTTGGAAAGTCAATGGTGGTGGGCAAACCAGTTGTGTGTTGGGGCATCCTTGATTTCTCAAGAAAAGAGCGTGATAGATTAGATGTTGGTAAGTTTGTTCAGAATCTTATCGTTAAGTACAAGAAGTTGGGTATTGGCTTGAAGGAGCCCGTTATTTATGAATCTGCTTCAATGAGATCACTTTCAAATGTGGATTATCTCTTTGAATTGCTCGAGGGAATTAAGGAGAATGCTTATAAAAAGGGCAATGGTTGTCCACTGCAATTTCTTCTGTGTGTGATGACTAGGAAGGATCCAGGTTACAGGTACTTAAAGTTCATTTCTGAGACCAAGGTTGGTATAGTGACACAGTGTTGTTTGTCTCCCATTGCTAATAAAGGGCAAGATCAATATCTGACTAATCTTTCCCTTAAGATTAATGCCAAGCTTGGAGGAAGCAACGTGGAGTTGGGTAATGGGCTACCTTACTTTAAGGGCGACGAACCAGTTATGTTTGTGGGGGCTGATGTTAATCATCCTGCTTCTAGGGACACAAGTAGTCCATCAATTGTTGCTGTGGTTGCAACTGTTAACTGGCCTGCTGCGAATCGTTATGCAGCACGTGTTTGCCCTCAACATCATCGTACTGAGAAGATTTTAAGCTTTGGGGAAATTTGCCTTGAGCTTGTTCAATGTTATGCGAGGTTAAATAAGGTTAGACCtgccaaaattattattttccgtGATGGGGTTAGTGAGGGCCAGTTTGATATGGTTTTAAATGAGGAGCTACAGGATTTGAAGAAAGCATTTCAAAGCATAGGTTTCTTCCCAACTATTACACTTATTGTGGCCCAAAAGAGACACCAAACTCGGTTGTTTCTTGAGAACAGAAATTCCGTTAGCAACGTATTTCCTGGAACAATCGTGGACACAAAAATCATACATCCTTTTGAGTTTGACTTCTATCTTTGTAGCCACCATGGAAGCTTGGGAACAAGCAAGCCCACGCACTATCATGTCTTGTGGGATGAACACAAGTTTACATCTGATGCATTGCAGAAACTCATATATGAAATGTGCTTCACCTTTGCCAGGTGCACTAAACCTGTATCTTTAGTGCCTCCGGTGTATTATGCTGACCTTGCAGCTTATAGAGGACGACTATACCATGAAGTGTTGGCCGAGATGCATTCTCCTGACTCAGGAGCTTCTTTATCATCATTATCTGGAGCTTCTTCATCGATTTCCTCAGCCACTTCTCTTGATCAGAAGTTTTACAGGCTGCATACTGACATGGAGAACAATATGTTCTTCATCTG 3251 0.4448 MERGGRGGSGGGRGRGRGSVGGWQGRGGGYGADGGGGGGGRGSHQQTGQHQGGYGGRGGGYGGRGPAQHPQGQPQPPPAGAWGRSSPGSGGGYGGRGPAQHSQVQPQPPPAGAWGRSSPGSGGAYGGRGPAQHSQGQPQPPPAGAWGRSGPVGRGAPNQGVWVPSTEGSSGGSYPRGGGGGRGGGNVVNPSPPISNPVPVPVSGSSEPNPVEKLEGLKISSENVNKIIPIRRPDGGGRLSIRTCRLYVNHFPVAFNPQSIIMHYNVDVTPELPPKHGRPKKISKSDLSLIREKLFSDDSQRLPLQMTAYDGEKNIFSAVPLPEETFKVVTSRGEDERTTTYVVTLTLVNKLELRKLKDYLSGHVLSIPRDILQGMDLVVKENPARCTVSVGRNFYSTREAQDLQAGIVAIRGFQHSLKPTSQGLSLCLDYSVLAFRKQMSVLDFLHEHNPSFNLNEIGRFRKYMEETLVGLKVNVTHRRTKQKYIVGRLTPKNTRYITFPVEDPESKSPPKNISLLDYFQDKYGVDIQYKDIPCLDLGKGNKMNYVPMELCVLVEGQRYPKEQLSFHAGKTLKDMSLAYPDNRMNTIRRMMQSEEGPCGGGIIQNFGMNVNMNMTKVEGRVIGPPELRLGKPNGEMMKIQLDPEKCNWNLLGKSMVVGKPVVCWGILDFSRKERDRLDVGKFVQNLIVKYKKLGIGLKEPVIYESASMRSLSNVDYLFELLEGIKENAYKKGNGCPLQFLLCVMTRKDPGYRYLKFISETKVGIVTQCCLSPIANKGQDQYLTNLSLKINAKLGGSNVELGNGLPYFKGDEPVMFVGADVNHPASRDTSSPSIVAVVATVNWPAANRYAARVCPQHHRTEKILSFGEICLELVQCYARLNKVRPAKIIIFRDGVSEGQFDMVLNEELQDLKKAFQSIGFFPTITLIVAQKRHQTRLFLENRNSVSNVFPGTIVDTKIIHPFEFDFYLCSHHGSLGTSKPTHYHVLWDEHKFTSDALQKLIYEMCFTFARCTKPVSLVPPVYYADLAAYRGRLYHEVLAEMHSPDSGASLSSLSGASSSISSATSLDQKFYRLHTDMENNMFFI 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01608 1083 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 183 1082 - -
Bva14g01608 1083 Pfam N-terminal domain of argonaute 242 378 IPR032474 -
Bva14g01608 1083 MobiDBLite consensus disorder prediction 1 212 - -
Bva14g01608 1083 SMART DUF1785_2 388 438 IPR014811 -
Bva14g01608 1083 Pfam Piwi domain 740 1031 IPR003165 GO:0003676
Bva14g01608 1083 ProSiteProfiles PAZ domain profile. 439 555 IPR003100 GO:0005515
Bva14g01608 1083 CDD PAZ_argonaute_like 439 554 - -
Bva14g01608 1083 Pfam Argonaute linker 1 domain 389 437 IPR014811 -
Bva14g01608 1083 CDD Piwi_ago-like 602 1033 IPR045246 -
Bva14g01608 1083 SMART PAZ_2_a_3 439 573 IPR003100 GO:0005515
Bva14g01608 1083 Pfam PAZ domain 456 564 IPR003100 GO:0005515
Bva14g01608 1083 SUPERFAMILY Ribonuclease H-like 728 1035 IPR012337 -
Bva14g01608 1083 Gene3D paz domain 433 559 - -
Bva14g01608 1083 SUPERFAMILY PAZ domain 434 592 IPR036085 GO:0005515
Bva14g01608 1083 Gene3D - 652 800 - -
Bva14g01608 1083 Gene3D - 807 1083 IPR036397 GO:0003676
Bva14g01608 1083 ProSiteProfiles Piwi domain profile. 739 1035 IPR003165 GO:0003676
Bva14g01608 1083 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 183 1082 - -
Bva14g01608 1083 SMART Piwi_a_2 739 1034 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01608 Bva-Chr14 8575302 8579879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01608 242 1055 Eukaryotic Initiation Factors Gene Family AT1G48410 37.050 2.21e-155 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01608 K11593 - gmx:100805250 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01608 14 8575302 8579879 Bva14g01608 14 8575302 8579879 ECH