Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01578 atggaaacaaatgATGGAAACAGAGAGCAGATTGTGGATGTTCGATCTGTCGTTGAAGCTGTTTCTGCAGAAGAAGGCGATGCCCCGGTGTACCAGGTTGAAAGCCTGTGCATGCGTTGCGGTGAAAACGGAATAACGAgatttttattgactttaatCCCACATTTCAGAAAGATTCTGTTGTCAGCTTTTGAATGTCCTCATTGTGGAGAGAGGAATAATGAAGTTCAGTTTGCTGGTGAAATTCAACCCCGTGGTTGTTGCTACTGTTTGAAGATCCCATCTGGCGATCAGAAGATGCTTGATCGACAAGTGGTAAAATCAGAATCTGCTACTATTAAGATACCAGAATTGGATTTTGAGATTCCTCCAGAGGCTCAGCGTGGCACTCTGTCAACGGTGGAAGGGATACTGGTGCGAGCTGCTGATGAACTGCAGGCACTTCAAGAAGAACGCAGGAAAGTTGATCCACAGACTGCTGAAGCAATTGATCAGTTCTTGATGAAATTGAGAGCCTGTTCAACAGGAGAATCATCTTTTAGCTTTATCCTTGATGATCCTACTGGAAACAGCTTCATTGAGAACCCgTTTGCCCCATCGTCTGATCCATCACTTAATATCAAGTTCTATGAACGAACTCCTGAGCAGCAAGCATCTTTGGGATATCTTGTTGACCCATCTCAGACAGAAGGAACTCAGGATGGGGCATTAACAGGGGAACAAGCTGGGCTTGATGATCAAGCAAGAAGAGAACCACATGGGTCAATTGGGGCAGCTGCTGGTCATCGAGCCATTGCACAGACTAATAGCGCAGAAATTGCGGAAGCCTTATTTCGTTATACTGCACCAGAAGAGGTGATGACTTTCCCATCGACTTGTGGTGCTTGTGCCGCGAGGTGTGAGACTCGAATGTTTGTGACCAACATTCCATACTTCCAGGAAGTTATTGTTATGGCAAGCACTTGTGATTCTTGTGGTTACCGAAACTCTGAGTTGAAACCTGGTGGGCGAATTcctgaaaaaggaaagaaaattacacTCTCTGTGAAAAATGTTAAAGACCTTAGCCGTGATGTGATAAAGTCTGATACTGCAAGTGTAAAAGTCCCCGAGCTTGACTTGGAGCTAGCAAGCGGCACTCTAGGAGGAATTGTTACGACTGTAGAAggtttaattacaaaaattagtGAAAGCCTTGAGAGGGTGCATGGATTTACCTTTGGAGATAGTCTTGACGAACATAAAAGAATCAAGTGGATAGACTTTAAAGCAAGGCTAAACAAGCTTCTAAGCTTGGAAGAGCCTTGGACTTTAATCCTTGATGATGCATTAGCCAATTCTTTCATTGCACCAGTGACAGACGATCTAAATGATGACAATCAATTAACGTttgaagaatttgaaaggTCATGGGAGCAAAATGAAGAACTAGGTCTGAACGATATCGATACCTCTTCTGCTGATGCTGCTTATGAAGCAGCAAATACTGCAAAAACTGAGTG 1502 0.4168 METNDGNREQIVDVRSVVEAVSAEEGDAPVYQVESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYCLKIPSGDQKMLDRQVVKSESATIKIPELDFEIPPEAQRGTLSTVEGILVRAADELQALQEERRKVDPQTAEAIDQFLMKLRACSTGESSFSFILDDPTGNSFIENPFAPSSDPSLNIKFYERTPEQQASLGYLVDPSQTEGTQDGALTGEQAGLDDQARREPHGSIGAAAGHRAIAQTNSAEIAEALFRYTAPEEVMTFPSTCGACAARCETRMFVTNIPYFQEVIVMASTCDSCGYRNSELKPGGRIPEKGKKITLSVKNVKDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDEHKRIKWIDFKARLNKLLSLEEPWTLILDDALANSFIAPVTDDLNDDNQLTFEEFERSWEQNEELGLNDIDTSSADAAYEAANTAKTE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01578 500 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 292 483 IPR004457 GO:0008270
Bva14g01578 500 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 37 219 IPR004457 GO:0008270
Bva14g01578 500 SMART zpr1 291 451 IPR004457 GO:0008270
Bva14g01578 500 SMART zpr1 35 195 IPR004457 GO:0008270
Bva14g01578 500 Gene3D ZPR1, A/B domain 81 222 IPR042451 -
Bva14g01578 500 Gene3D ZPR1, A/B domain 337 479 IPR042451 -
Bva14g01578 500 Gene3D ZPR1, zinc finger domain 281 336 IPR042452 -
Bva14g01578 500 Gene3D ZPR1, zinc finger domain 26 80 IPR042452 -
Bva14g01578 500 PANTHER ZINC FINGER PROTEIN ZPR1 9 494 IPR040141 -
Bva14g01578 500 Pfam ZPR1 zinc-finger domain 291 449 IPR004457 GO:0008270
Bva14g01578 500 Pfam ZPR1 zinc-finger domain 35 194 IPR004457 GO:0008270
Bva14g01578 500 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Bva14g01578 500 Coils Coil 131 151 - -
Bva14g01578 500 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 9 494 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01578 5 498 C2H2 Transcription Factor Family AT5G22480 77.172 0.0 790