Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01562 ATGGATGTTGTTTGGGCTGTTGCTTCAAAAGTTTCGGAACTTACCGTGGAACCAATTGGAACGCAGTTGGGTTATCTGGTTTACTACAGAAGCAACCTGAATGAGCTCAAGGAACAACTTGAGAAACTTGCTGCTAAAAGAGAGAGCCTACAACATGCTGTGGAAGAAGATCGAAGAAGTGGCAGAGAAATTGAAAGCAATGTGAAGAAATGGTTTGATAGggtgaacaaaataaaagctgAGGCAGAGAAATTTAATGGAGAGGGAAGCCAAGCAAATATTGGGTGTTCCTATAAGTCATGTCCTAATTTGTGGTTGCTCTATAAATGGAGCAGAAGAGCGAAGAAAATGGcagatgaaattaaaatgatggaGGATGGAAAGTTTGATAGGCTTTCTTACACTAAGCTTCCAGAATGGCCAGCCTCATCCTCAACTTTGGGAGGTGACACATTTGAATCGAGGGTGAGAACGTTGAGTAGGATCATGGAAGTATTGGCAGATCCAGCAACTAATATGGTTGGAGTACATGGACTCCCTGGTGTGGGCAAGACCACTCTAGCCAAAGAAGTTGCTAGCAAAGCTAAAGAGGAAAAGTTATATGATACGGTGGTTATGGTTGAGGTGAAACAAAAGCCGGATATTAAGACAATTCAAAGAGAAATGGCTGAAATGGTGGGTCTTAAATTTGACGAAGATAGTCAAGTTATTAGAGCTAGTCGGCTAAATGAGAGGTTGAGGCAAGGGAAGAAGTTGCTTGTTATACTAGATGATCTTTGGGAGAGACTTGATTTACAGAAAATAGGAATCCCATTtggtgaagaaaagaaaggaggcAAAATCTCATTACTTGATGATGAGTACAAGGgttgcaaaatatttttgacatcTAGAAGTGAAGAGAGGCTGTTCAAGGAGATGGCTGAACTCCATGATGATTCCCCTCCAGATTTGCTAACTATAGCCAATGAAGTGAATGAAAGGTGTGCAAGATTGCCATTAGCGATAGTTACAGTTGCAAGAGCACTAAGGAATAAGAGCTTATCAACATGGAGAGATGCCTTACGTCAATTACAACAGCCGTCGCTAAGAAAAGTCCCTGGATTGAAGGATGTAGATTCCTCCATAAAACTGAGTTATGACTATTTAGAAGGCAGGGATCTCAAATCATTCTTCCTGTTGAGTGCCATGTTATCTAATGATGCAATGACTTCTGATCTGTTCAAATATTGCATTGGATTGGGTTTATTTGAAGGCATTTATATAGTGGAGGAATCTTTGGATAGATTGCAGACGAtgatgaaaacattaaaggtATCGTGTCTATTGTTGGATGGCAGTTCTAGTGatcattttaaaatgcatGATGTTGTTCGTGATTCTGCCTTATCAATagcatttaatgaaaaatgtgCATTTGTGAAGAGATATGAAAAGATACATAACTGGCCAGACAAAGGTCAGCTGGAAAACTATAAGTACTTGTGTTTCCGAGGCTGTGACATTGATGAGCCTCCTCCACAGTTAAATTGTCCAAGCTTAGAGTTATTCCTATTTGAAAGCAAGCATGATAATTTGTCTTTGCcagatgatatttttaaaagaatgcCACTTCTTAGGGTGTtgactcattttaatttctcttccttgccTACACCGATCACTTCCCTCGAGAATCTTACATCGTTGTGCCTACACCAATGTGAATTGAAAGATATTGCTATGATCGGAGTTCTGAGGAATCTAAAAGTTCTCAGTCTTACCCATTCAATTATTCAAGAGTTGCCTCACGAACTTGCGTGTTTGACACGGTTACAATTGTTAGACTTGAGCAACTGCAGAAAACTAGCAGTTATTCCACAAAATACTATATCAAGATTGAATAAGTTGGAAGCATTGTATTTGGAGAATAGTTTCAACCGGTGGCAAGACTA 1934 0.3635 MDVVWAVASKVSELTVEPIGTQLGYLVYYRSNLNELKEQLEKLAAKRESLQHAVEEDRRSGREIESNVKKWFDRVNKIKAEAEKFNGEGSQANIGCSYKSCPNLWLLYKWSRRAKKMADEIKMMEDGKFDRLSYTKLPEWPASSSTLGGDTFESRVRTLSRIMEVLADPATNMVGVHGLPGVGKTTLAKEVASKAKEEKLYDTVVMVEVKQKPDIKTIQREMAEMVGLKFDEDSQVIRASRLNERLRQGKKLLVILDDLWERLDLQKIGIPFGEEKKGGKISLLDDEYKGCKIFLTSRSEERLFKEMAELHDDSPPDLLTIANEVNERCARLPLAIVTVARALRNKSLSTWRDALRQLQQPSLRKVPGLKDVDSSIKLSYDYLEGRDLKSFFLLSAMLSNDAMTSDLFKYCIGLGLFEGIYIVEESLDRLQTMMKTLKVSCLLLDGSSSDHFKMHDVVRDSALSIAFNEKCAFVKRYEKIHNWPDKGQLENYKYLCFRGCDIDEPPPQLNCPSLELFLFESKHDNLSLPDDIFKRMPLLRVLTHFNFSSLPTPITSLENLTSLCLHQCELKDIAMIGVLRNLKVLSLTHSIIQELPHELACLTRLQLLDLSNCRKLAVIPQNTISRLNKLEALYLENSFNRWQD 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01562 644 PRINTS Disease resistance protein signature 246 260 - -
Bva14g01562 644 PRINTS Disease resistance protein signature 329 343 - -
Bva14g01562 644 PRINTS Disease resistance protein signature 173 188 - -
Bva14g01562 644 PRINTS Disease resistance protein signature 600 616 - -
Bva14g01562 644 PANTHER PHOSPHATASE, PUTATIVE-RELATED 3 643 - -
Bva14g01562 644 SUPERFAMILY L domain-like 453 639 - -
Bva14g01562 644 SMART AAA_5 170 344 IPR003593 -
Bva14g01562 644 Gene3D Ribonuclease Inhibitor 450 644 IPR032675 -
Bva14g01562 644 PANTHER - 3 643 - -
Bva14g01562 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 393 IPR027417 -
Bva14g01562 644 Pfam NB-ARC domain 159 381 IPR002182 GO:0043531
Bva14g01562 644 Coils Coil 26 60 - -
Bva14g01562 644 CDD AAA 177 306 - -
Bva14g01562 644 Gene3D - 145 309 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01562 Bva-Chr14 8172168 8174171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01562 174 465 WRKY Transcription Factor Family AT5G45050 25.478 1.29e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01562 - - vvi:104881473 492.271