Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01538 ATGGTTTTCTGCTCCTATAACTCCAATTTTTCATCTGGGTCTGAAATTTCTACGCTGCTGAATCCGAATTCGGAGACCCTTTATGCTGCAAATGGGGTTTTGCGAGATGGGTCTCCATCGTCGCAATCGTTGGTTTTGGATGGTGAAAAGGGGGAGCTGGTGAAGTCTCCGGCAAAAATTGGGAAGAAAGAAGTGTCCAAGGAAAAAGCTTTGGCTGCTTTGAAGAGCCATAGTGAAGCAGAGAGGAGGAGAAGGGAGAGAATCAATGGCCATCTTGATACCCTTCGTCGTCTTGTGCCCTGCACAGAAAAGATGGATAAAGCCACATTACTTGCTGAAGTAATCAGTCAAGTGAAGGAACTGAAGAAGAATGCAATGGAAGCAAGCAAAGGTTTTCTAATCCCAATGGACGTTGATGAAGTAAAAGTCGAACCGTACAAAGATGCAGGAGATGGATCATTGTCTTATATGGCATCTGTCTGCTGCGATTACCGGCCGGAGCTTCTATCTGATCTAAGACAAGCTCTTGATGCTCTTCCACTACAATTGGTGAGGGCAGAAATATCAACTCTGGGAGGCAGAGTGAAGAACGTGTTCGTTTTCAGTTGCTGCAAAAGGGAGAATGTTCATGTCGAATCATGCCAGCTTCTTGCAGATACTGTTCACAAGGCATTAAGTTCTGTGCTGGACAACGCTGCTAGATCACTGGAATACTCTCTGAGAATGTCATTTCCAAACAAACGCCGACGGCTTTGTTTCGTGGAAACGTCTGCTTCTGCTTCATGCAACATAGATCTTCTTGTTCATGCTGATGATGGCAGCCTTCTGTTGtg 833 0.4514 MVFCSYNSNFSSGSEISTLLNPNSETLYAANGVLRDGSPSSQSLVLDGEKGELVKSPAKIGKKEVSKEKALAALKSHSEAERRRRERINGHLDTLRRLVPCTEKMDKATLLAEVISQVKELKKNAMEASKGFLIPMDVDEVKVEPYKDAGDGSLSYMASVCCDYRPELLSDLRQALDALPLQLVRAEISTLGGRVKNVFVFSCCKRENVHVESCQLLADTVHKALSSVLDNAARSLEYSLRMSFPNKRRRLCFVETSASASCNIDLLVHADDGSLLL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01538 277 PANTHER DNA BINDING PROTEIN-LIKE 6 261 - -
Bva14g01538 277 Pfam Helix-loop-helix DNA-binding domain 76 121 IPR011598 GO:0046983
Bva14g01538 277 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
Bva14g01538 277 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 124 IPR036638 GO:0046983
Bva14g01538 277 Gene3D - 66 130 IPR036638 GO:0046983
Bva14g01538 277 SMART finulus 78 127 IPR011598 GO:0046983
Bva14g01538 277 PANTHER TRANSCRIPTION FACTOR BHLH30 6 261 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01538 Bva-Chr14 8008036 8011621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01538 65 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 43.429 1.27e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva14g01538 HLH 3.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01538 - - gmx:100804756 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01538 14 8008036 8011621 Bva14g01538 14 8008036 8011621 ECH