Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01486 ATGGGATTTGAAGATGAAGCTGGTGATTCGCTTGGCCTTGGTGTCAAAGTCATGTTAGCTTCTGCTTTCGCCTTATTTGCTATCGTTTTGCTCGTCATCATCTTCCATTTCTACATAAGATCTCGCCTGAGATACGAGCAGAGAAGACGCCGTGAGCTTGTTTTTCAGATCACTACTCAGATTTCGCCGATTGATGTGGGCTCTGTGGAGTTATCTCCAAATTCTGGACTTGACCCCGTGGTCATAGATTCACTGCCTAAACTCTTGTACAAGAATTCAGAGCAGTTCAGACAAGGTGAAGTTATGGAGTGTTCGATTTGCTTGGGAGCTATTTTGGAAGATACGACGATTAGGGTTTTGCCAAACTGTAAGCACGTGTTTCATGTTGACTGTGTTGATACGTGGTTTGGTTCGAACACTACTTGTCCGATTTGCCGCACTGTTGCTGAGCCCACGGTGCAGATCGGTCATGGTCATTTGGAGACACGGGTTCAACCCACAGCACCAGAGGTGGAGACACGGGGTAGTTG 530 0.4679 MGFEDEAGDSLGLGVKVMLASAFALFAIVLLVIIFHFYIRSRLRYEQRRRRELVFQITTQISPIDVGSVELSPNSGLDPVVIDSLPKLLYKNSEQFRQGEVMECSICLGAILEDTTIRVLPNCKHVFHVDCVDTWFGSNTTCPICRTVAEPTVQIGHGHLETRVQPTAPEVETRGS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01486 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 151 IPR013083 -
Bva14g01486 176 Pfam Ring finger domain 103 146 IPR001841 -
Bva14g01486 176 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 1 165 - -
Bva14g01486 176 SUPERFAMILY RING/U-box 82 151 - -
Bva14g01486 176 PANTHER RING FINGER DOMAIN-CONTAINING 1 165 - -
Bva14g01486 176 CDD mRING-H2-C3H2C2D_ZSWM2 103 146 - -
Bva14g01486 176 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Bva14g01486 176 SMART ring_2 104 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01486 Bva-Chr14 7658011 7658541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01486 10 174 C3H Transcription Factor Family AT2G42360 38.462 2.10e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01486 K19038 - gmx:100779105 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01486 14 7658011 7658541 Bva14g01486 14 7658011 7658541 ECH