Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01482 ATgagttcttttctttccagaaTTGTTAATACAACTCCAAGttttctgcttttgttttcattttatgtctCTCTTCTCCTATTCGAGTGCTTTGCAAGAGTTGCAGCAGCCGACAACAATGAAATTACAGAAGTTGGAGCAATTGTTGATCTCAGTTCTCCAAGTGGAACAGAAACCAGGATAGCTATGGAAATTGCAGCTCAAAGTTTTAATAGCTATTCAAAGGCTCACAGTATCagtcttcatttttatgactCTGGTGGTGGAGACCCTTTAAAAGCAGCTTCTGCTGCTGAGGAGCTAATcagagagaagaaagtgaaAGTTATTATTGGCATGGAGACTTGGCAGGAAGCTGCTCTTGTAGCAGAAGTTGGATATAAAGCTCAAGTTCCCGTTATTTCATTATCAGCACCCACAATAGCCCCGCCATTAATGCAGCTTCAATGGCCTTTATCGATTCAAATGGCCAATGATCAGACTGCAAATATGAACTGCATAGCAGATATTGTTCACACATACTACTGGTCAAAGGTTATAGCCATATACGAAGATGACCCTTATAGTGGTGATTCTGGAATGTTAGGCCTCCTATCTGAGTCTCTCCAAAAAGTTAACTCAAAGATAGAGTATAAACTTGTCCTTCCACCATTTAGTTCATTATCTGATCCAAAAAGGACCATTCGAGATGAGCTGAAGAAGCTATTGACAAAACAATCTCGTGTTTTCGTTGTTCTGAAAGCATCATTACCCATGGTAGATCACTTGTTTATTGCGGCTAATCAGCCGGAGATCGGGCTTTTAGCGAAAGAATCAGCTTGGATAATCAATGAAGGCATTGCAGGTATGCTGGAGTCTGCAAATAACTCTCTTTTATCCTCAATGGAAGGTAGTCTTGGAATCAAGACCTACCATTCTACAGATACTAATGCTTACAGTCAGTTCCTAGAAAAATTCCAGCATACAGGAAAGATTAAGTATAAACCGGGAGCACGCGTGCTACGAGCTTATGACAGCATTAGAATTGTCACAAATGCATTAGAGAACATGAAAGGTAATACAAGTGACTCAAACTTGTTCTCGAAGCAAATGCAGTCAAGTAACTTTTCTGGTTTAAGTGGGAACATAAGATTCAAAGATGGCCACTTATGCTATCCTCCAATATTGCAAGTCATTAATGTGGTTAACAACAAACGGAGAGAACTGGAGTTTTGGAAACCAGATTTAGGGTTCTTTGCAACTCTTGAGTCAGAGGAAATAGCTAAGAAAAGCTTGACTAGTACAGTGGTTTGGCCTGGAGGTCTTAATAGGTCTAATCCAAAGGGATGGAAAATACCTAACACTCTACAAGTAGCAGTTCCTATAAATCCTTCTTTCAAGAATTTTGTAACGAAGTCCGGAGATGATTATGATGGTTTCTGCATTAAGCTTTTCTTTGAGGTGAAAAACATCCTACAGGAAGAGGAAGAGTACTAtgatctaaaatataattttaccgACTTCAATATCTCCTATGATTTTCTTCTACAAGATTTCATTAATGGGAACTATGATGTTATTGTTGGAGATATAACTATTCTTGCTGAACGATCAAGGATCGTGTCCTTTACTCAGCCGTACACTGAGTCAGGATTGTCCCTCATAGTTCCAGCAGAGGCTGAAGAATCAGCATGGATGTTTATGAAGCCTTTTAGCAGGGAAATGTGGATTGCCACTTGTGGCATTCTCATCTATACAATGTTTATCGTCTGGTTCCTTGAGCATCAATCCAATCCAGAATTTCAGGGACCATGGAAGAATCAGATCAGCAACACACTTTGGTTTGCATTCTGTTCCATACTTTTTGCCCACAGGGAGAAAATCTACAGCAACTCGGCACGAATAGTCGTCGGCGCATGGTTATTTCTAGTGTTTGTTCTAACCTCGAGCTATACTGCGAGCCTTTCTTCGATGCTCACTGTCAAACGAATAAGGTCTGCAAGAGATGTTGGGTGGCTAAAGGAAAACAACTTAACAGTTGGTTGTGATGGTAGGAATACCTTCGTAAGGAACTATTTGGAGGATGTGTATCAACTCCAGACAGAGAAAATCATTGATTTTTATGAAGAAGATGACATTTTAGAGAAATTTCACAGCAAGAAAATTGATGCTGTCTTTCTTGAGAGTCCATATGAGAAAGTTTTCTTGAATAAGTACTGCAACAAGTTTGTTTCAAGCACAGCTGCCTATAAGTTTGGAGGATTGGGCTTTGTATTCCAGAAAGGCTCACCTATGGCAGTAGATTTCTCTAAAGCTATTTTAAAACTTGCCGAAAATGGAACATTGAAAAATTTGGAAGAGGAATTGTTAACCCCTTCCAAGGGATGCTCAAGCAACTCAACTTCTGCTGAAACTGAGAGCTTGACTCTCAACAACTTTTCAGGTCTCTATATTATATCTGCTGCCACATCCACCATATGCTTAGCACTGGCTTTGTTGAAGAACTGCCACCACCATCATGAAACTGGTCAAGACAATGTAACTCCTGGCGACAATAATGTTTTGAAGGATGCATTCAGTTTTAGTACCAGCATTTACAATGGAACTGCCAATGCTATAGGAAGATCTGCAACTTTTAGTAATTCGCAGAGCATTAGCCATAGGAATTCTTCGAGGAGATGGGAGAGTACAAGCACTTCTGATGATCACAATGTCCCACATCGCTCACATTCAGCTCAAATAGAAATGGTGTA 2732 0.3862 MSSFLSRIVNTTPSFLLLFSFYVSLLLFECFARVAAADNNEITEVGAIVDLSSPSGTETRIAMEIAAQSFNSYSKAHSISLHFYDSGGGDPLKAASAAEELIREKKVKVIIGMETWQEAALVAEVGYKAQVPVISLSAPTIAPPLMQLQWPLSIQMANDQTANMNCIADIVHTYYWSKVIAIYEDDPYSGDSGMLGLLSESLQKVNSKIEYKLVLPPFSSLSDPKRTIRDELKKLLTKQSRVFVVLKASLPMVDHLFIAANQPEIGLLAKESAWIINEGIAGMLESANNSLLSSMEGSLGIKTYHSTDTNAYSQFLEKFQHTGKIKYKPGARVLRAYDSIRIVTNALENMKGNTSDSNLFSKQMQSSNFSGLSGNIRFKDGHLCYPPILQVINVVNNKRRELEFWKPDLGFFATLESEEIAKKSLTSTVVWPGGLNRSNPKGWKIPNTLQVAVPINPSFKNFVTKSGDDYDGFCIKLFFEVKNILQEEEEYYDLKYNFTDFNISYDFLLQDFINGNYDVIVGDITILAERSRIVSFTQPYTESGLSLIVPAEAEESAWMFMKPFSREMWIATCGILIYTMFIVWFLEHQSNPEFQGPWKNQISNTLWFAFCSILFAHREKIYSNSARIVVGAWLFLVFVLTSSYTASLSSMLTVKRIRSARDVGWLKENNLTVGCDGRNTFVRNYLEDVYQLQTEKIIDFYEEDDILEKFHSKKIDAVFLESPYEKVFLNKYCNKFVSSTAAYKFGGLGFVFQKGSPMAVDFSKAILKLAENGTLKNLEEELLTPSKGCSSNSTSAETESLTLNNFSGLYIISAATSTICLALALLKNCHHHHETGQDNVTPGDNNVLKDAFSFSTSIYNGTANAIGRSATFSNSQSISHRNSSRRWESTSTSDDHNVPHRSHSAQIEMV 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01482 910 MobiDBLite consensus disorder prediction 872 910 - -
Bva14g01482 910 SMART GluR_14 450 785 IPR001320 GO:0015276|GO:0016020
Bva14g01482 910 Gene3D - 165 328 - -
Bva14g01482 910 PIRSF IGluLR_plant 13 910 IPR017103 -
Bva14g01482 910 SUPERFAMILY Periplasmic binding protein-like II 444 780 - -
Bva14g01482 910 Pfam Ligand-gated ion channel 782 815 IPR001320 GO:0015276|GO:0016020
Bva14g01482 910 Gene3D - 690 784 - -
Bva14g01482 910 MobiDBLite consensus disorder prediction 872 886 - -
Bva14g01482 910 PANTHER GLUTAMATE RECEPTOR 13 907 - -
Bva14g01482 910 Pfam Bacterial extracellular solute-binding proteins, family 3 489 781 IPR001638 -
Bva14g01482 910 Pfam Receptor family ligand binding region 61 394 IPR001828 -
Bva14g01482 910 Gene3D - 558 689 - -
Bva14g01482 910 CDD PBP1_GABAb_receptor_plant 45 415 IPR044440 -
Bva14g01482 910 SUPERFAMILY Periplasmic binding protein-like I 44 443 IPR028082 -
Bva14g01482 910 Gene3D - 39 164 - -
Bva14g01482 910 Gene3D - 446 557 - -
Bva14g01482 910 MobiDBLite consensus disorder prediction 887 902 - -
Bva14g01482 910 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 13 907 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01482 Bva-Chr14 7622118 7627278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01482 11 839 Ion Channels AT2G29120 31.015 3.62e-114 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01482 - - gmx:100818078 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01482 14 7622118 7627278 Bva14g01482 14 7622118 7627278 ECH