Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01481 ATGCATTTCCCATTGACAACTTTTAATGCACTTCCAAGATTCTGGttactcttttgtttattctaCTCCTTTGTCATCATCAATGGATCATGCAGAGGTCAGGCCACCAGTAGAGACAGAGTTATATCTATTGGTGCAATCATTGATGCTGACTCTCGTATTGGTAAAGAACAGAAAGTAGCAATggaaatttcagctcaaaattacaataacaCTTCTAAGACCCACAATTTGTCCCTCTACTTTCAGAACCCCACTAAGGAGCCCTTGAGAAGTATCTCTCTTGCTGAAGAGATGATTAAAGTGCAGAAAGTGCAAGCGATCATAGGCATGCAAACATGGCAGCAGGCACTTCTAGTGGCTGATATTGGCAACCAAGCTCATGTTCCTGTCATATCATTTGCAGCACCTGCCATTACCCCGCCATTGATGAAAACTCGCTGGCCTTTCCTAGTAAGATTGGCTAACAATGGCACTGCACACGTCAAATGCATTGCAAACATAGTGCATCATCATGGTTGGCATAGAGTAATAGCCATTTATGAAGATGATGCCTATGGTGGAGACTATGGCATGCTAGCACTCCTCTCTGAGGCCCTTCAAGATGTTGGTTCAATGGTTGAGTGCTATTTAGCACTTCCACCAATTTCTTCTCTACCTGATCCAAGAGAAACAGTTCGTGAAGAGCTCCTTAAGTTAATCCAAACAACGGAATCTCGGGTTTTTATTGTTCTTCAATCATCTCTGGAAATGGTGGTTCATTTGTTCAGGGAAGCTTCAGAAGTGGGACTTGTGGATAGAGAATCTGCGTGGATTATCCCAGAGAGCATAACTAATTTGCTGGACTCTGTCAACAAATCTGCTATTTCTTACATGGAAGGAGCTTTAGGAATTAAGAATTACTATCCTGAAAATAGCACTGAGTATCAACATTTTGAATCTGAGTTCAGGAAAATTTTCAGGGCCAAGTACCCAGAGGAAGATGACAGAAACCCTGGATTTTATGCTTTGCAAGCATATGATGGCATGAAAGTTGTCACACAAGCAATCGATCGATTCACCGGTCGCAGCAGCAGAACAAGGACATTGCTAGATGAAGTCTTGTCTATCAATTTCCATGGTTTAAGTGGAAAGATACAATTTGAAGGAGGGCAGCTTTTGCAGAATCCTATTCTGAGCATTGTCAAAGTATTTGGGAAGGGTTACAAAGAGTACCTCTTCTGGAATCAACAAAAAGGGTTCAACACAGAACCAAATGGAGATCATGCAGATGGTAGTTTAGAAGGTTTTGTTGATATACTTTGGCCTGGAAATTCCGGGAAGGCGCCAAAAGGATGGAATATGCCtactaaacaaaagaaaatgagaattgCAGTCCCAGGAAGAACCTCATTTTCCAAGTTTGTCAAGGTTGAAGAGAAAAACGATGGAACTCGTCAGATTACTGGATTCTGCATTAAGATTTTTGAGAAGGTGATAGAACTTTTGGAGTATGATCTTGCATTTGAACTTTTTCCCATCAATGCAACCTACCCTGATCTGGTTGAACTTGTTTATAACAAGACTTTTGATGCCGTGGTTGGAGACATGACCATACTAGAAGAAAGATTACAAAAAGTTGACTTTACTGTGTCATATACAGAATCAGGACTATCAATGATAGTTCCAGCAAAATCTCAAGAGTCAGCGTGGACATTCATGAAGCCCTTCACATGGCAAATGTGGGCTGTGACTGGTGCCATTTTAGTTTACACAATGTTTATAGTATGGTATCTCGAGAGAGAACCCAATCCAGAGTTTCATGGTGATTGGAAGAGACAGATTAGCACTGCACTTTGGTTTACCTTCTCCTCTTTATTCTTTGCTCATAGGGAGAAAATGTACAGCAACTTAACTCGTGTGGTGATGGTAGTGTGgctctttcttgttttgattctGAACTCAAGCTATACTGCTAGTCTTTCTTCAATGCTCACAGTTCAACAACTGGAGCCAACTGTTACAGACATTGAATGGCTGAAGAGGAACAACAAGAAGATTGGTTGTGATGGTGACTCATTTGTTCGGTCATATCTGGAAAACATCGAAAAGTTCAAGCCAGAGAACATCGTACATGTGAGAGATGAAGACAAATATGTTGAAGAATTCAGACAGAACAACATTGCAGCCGCCTTTCTTGAACTACCTTATGAGAAAGTATTCATCAATAAGTACTGCGAAGGGTATTCTGACTTCACACCCACCACAAGATTTGGAGGACTAGCCTTTATATTTCAGAAAGGCTCCCCATTGACCGAAGATGTTTCTAAAGCTATATTGCAGCTAGCAGAGAAAAAAGTTCTGAAAACACTGGAACAAGAATGGTTGACTTCACACCAGTGCCCAACTAGCTCCAATAGAGAGAGTTTGAGGCTAGCTAGCTTTTGGCTTCTCTACATCATATCTGGTGCTATGTCTACCATTTGCTTTCTGCTTTCTGTTTTCAGATCACTGAAAACTGGCCAACATCGTCAGAATGAGGCACATGAAGCAATGAGATCCCAAGTGAGGAGAGTATTTGGAAGAGTATA 2570 0.3996 MHFPLTTFNALPRFWLLFCLFYSFVIINGSCRGQATSRDRVISIGAIIDADSRIGKEQKVAMEISAQNYNNTSKTHNLSLYFQNPTKEPLRSISLAEEMIKVQKVQAIIGMQTWQQALLVADIGNQAHVPVISFAAPAITPPLMKTRWPFLVRLANNGTAHVKCIANIVHHHGWHRVIAIYEDDAYGGDYGMLALLSEALQDVGSMVECYLALPPISSLPDPRETVREELLKLIQTTESRVFIVLQSSLEMVVHLFREASEVGLVDRESAWIIPESITNLLDSVNKSAISYMEGALGIKNYYPENSTEYQHFESEFRKIFRAKYPEEDDRNPGFYALQAYDGMKVVTQAIDRFTGRSSRTRTLLDEVLSINFHGLSGKIQFEGGQLLQNPILSIVKVFGKGYKEYLFWNQQKGFNTEPNGDHADGSLEGFVDILWPGNSGKAPKGWNMPTKQKKMRIAVPGRTSFSKFVKVEEKNDGTRQITGFCIKIFEKVIELLEYDLAFELFPINATYPDLVELVYNKTFDAVVGDMTILEERLQKVDFTVSYTESGLSMIVPAKSQESAWTFMKPFTWQMWAVTGAILVYTMFIVWYLEREPNPEFHGDWKRQISTALWFTFSSLFFAHREKMYSNLTRVVMVVWLFLVLILNSSYTASLSSMLTVQQLEPTVTDIEWLKRNNKKIGCDGDSFVRSYLENIEKFKPENIVHVRDEDKYVEEFRQNNIAAAFLELPYEKVFINKYCEGYSDFTPTTRFGGLAFIFQKGSPLTEDVSKAILQLAEKKVLKTLEQEWLTSHQCPTSSNRESLRLASFWLLYIISGAMSTICFLLSVFRSLKTGQHRQNEAHEAMRSQVRRVFGRV 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01481 856 SUPERFAMILY Periplasmic binding protein-like I 37 446 IPR028082 -
Bva14g01481 856 Gene3D - 563 699 - -
Bva14g01481 856 Gene3D - 159 331 - -
Bva14g01481 856 SUPERFAMILY Periplasmic binding protein-like II 433 791 - -
Bva14g01481 856 CDD GluR_Plant 453 789 - -
Bva14g01481 856 Pfam Ligand-gated ion channel 791 816 IPR001320 GO:0015276|GO:0016020
Bva14g01481 856 Pfam Bacterial extracellular solute-binding proteins, family 3 476 790 IPR001638 -
Bva14g01481 856 SMART GluR_14 456 791 IPR001320 GO:0015276|GO:0016020
Bva14g01481 856 CDD PBP1_GABAb_receptor_plant 43 414 IPR044440 -
Bva14g01481 856 Pfam Receptor family ligand binding region 64 385 IPR001828 -
Bva14g01481 856 Gene3D - 349 454 - -
Bva14g01481 856 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 838 - -
Bva14g01481 856 Gene3D - 455 562 - -
Bva14g01481 856 Gene3D - 703 795 - -
Bva14g01481 856 PANTHER GLUTAMATE RECEPTOR 3.4 29 838 - -
Bva14g01481 856 PIRSF IGluLR_plant 9 854 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01481 Bva-Chr14 7612029 7617101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01481 4 850 Ion Channels AT2G29120 31.823 1.54e-140 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01481 - - aprc:113859865 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01481 14 7612029 7617101 Bva14g01481 14 7612029 7617101 ECH