Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01466 ATGGCTTCCTCCAACAGACACTGGCCAAGCATGTTCAAGTCCAAGCCCTGCAACACCCACCACCAGTGGCAACATGACATCAACTCCTCCCTCATCTCCACTAGCTGCCACAGAAGCCCTTATACCTCAGTTGGAGGGTGTGAGGAGAGGAGTCCAGAGCCAAAGCCAAGGTGGAATCCAAAGCCTGAACAAATTAGGATTCTTGAGGCCATTTTCAACTCAGGGATGGTGAACCCACCAAGGGATGAGATAAGGAAGATAAGGGCACAGTTGCAAGAGTATGGTCAAGTGGGTGATGCCAATGTCTTCTATTGGTTCCAAAATCGAAAATCCAGAAGCAAGCACAAGCTTCGTAACCTCCAGAACTCAAAGAACAATAACCAAACCAACCCACAAAGCCAAAACCCTTGTTCCTTTTCTCCCACCACCAACACTACAGCACCCAATTCAtcatcctcttcctcttctgaGAAATCATCTCCAAAAGAGATAATACCCAGCAAGGAATTCTCAATTGGGTATTCTAATGTGACTGAGGTGGTACCAAATTCCCCTAACACTTCTGTGAACCAGACCTATTTTCATCCCCATAGTGAGAACCCTACTCTATCTCCATCTGAGCCCTTCTTCTACCCAATGCAAGTGCAGCATAACAATGGAGGTGCTAATATGACGCAGGGATTTTGCTTCTCTGAGTTCTCTGATTTGGTTCagcttcatcaaaatcaagctCATTCTGAGCAACAAAATGTTGGGCCATGCACTAATCTCTTGCTTAGTGAGATTATGAGCAATAGTAATGGTGGAGTTGCTGTTGGTTATtcaagaaaagaggaagatcATGGAAAGGTCATGAAGATAATGCAGCAACACCCACAGCAGCTCAGTTTCTGTGTCACTTCTGCGGCCTCAACCTCTCTCACTCACAATACTGTATATGTCCCTTCCATTGCCACCACCACTGTTACTGTTCCATCTCCCATCACTCCTCAAATTCAAGGTGTTGGTGAACCGGGGGCAGTTGGCCCAGCTGGTGGCCAGGCAAAATGCACGGTGTTCATAAACGACGCCGCATTCGAGGTTGCGGTGGGACCATTCGACGTGCGTGCGGCTTTTGGCTATGACGCGGTTCTCATCCACGCTGCTTCTGGTCAGCCCGTTCCCACCAATGAGTGGGGTGTCACCCACTCACTCCAGCACGGCGCATTTTATTATGTGATTTA 1223 0.4587 MASSNRHWPSMFKSKPCNTHHQWQHDINSSLISTSCHRSPYTSVGGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRNLQNSKNNNQTNPQSQNPCSFSPTTNTTAPNSSSSSSSEKSSPKEIIPSKEFSIGYSNVTEVVPNSPNTSVNQTYFHPHSENPTLSPSEPFFYPMQVQHNNGGANMTQGFCFSEFSDLVQLHQNQAHSEQQNVGPCTNLLLSEIMSNSNGGVAVGYSRKEEDHGKVMKIMQQHPQQLSFCVTSAASTSLTHNTVYVPSIATTTVTVPSPITPQIQGVGEPGAVGPAGGQAKCTVFINDAAFEVAVGPFDVRAAFGYDAVLIHAASGQPVPTNEWGVTHSLQHGAFYYVI 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01466 407 SMART HOX_1 53 120 IPR001356 GO:0003677
Bva14g01466 407 ProSiteProfiles 'Homeobox' domain profile. 51 116 IPR001356 GO:0003677
Bva14g01466 407 MobiDBLite consensus disorder prediction 121 161 - -
Bva14g01466 407 Pfam Homeodomain 55 115 IPR001356 GO:0003677
Bva14g01466 407 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 407 IPR044557 GO:0003700|GO:0050793
Bva14g01466 407 SUPERFAMILY Homeodomain-like 51 118 IPR009057 -
Bva14g01466 407 CDD homeodomain 54 116 IPR001356 GO:0003677
Bva14g01466 407 MobiDBLite consensus disorder prediction 121 163 - -
Bva14g01466 407 MobiDBLite consensus disorder prediction 42 61 - -
Bva14g01466 407 Gene3D - 55 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01466 Bva-Chr14 7513538 7515742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01466 1 407 Wox Gene Family AT2G33880 44.342 8.96e-87 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva14g01466 Homeodomain 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01466 - - gmx:100804839 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01466 14 7513538 7515742 Bva14g01466 14 7513538 7515742 ECH