LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva14g01450	atgttGCAGTGGATTTTACATGATTGGAATGATGAACAATGTGTACAAATACTGAAGAATTGTAGAGGACCTATCACGGATGAATGCAAGAGGGGTAAGGTGATTATCATAGAAATGGCGACGGATGCAAAGAGTGATGACTGTGAATTGGCTGAGCTCAAACTCTTCTTCGAGTTAAATATGATGGCTAAGTACAGTGGCAAAGAAAGAAGTGAAAAGGAATGTGCAAAACTATTCTCAGAGGCAGATATCTGGCACTTCTTTCGGAGCTGGTTTCGCGACAATAGCGAGGCCAATCTATTCGAGTTTGCATATGGGAAGGGTTTCTGGGAGTTTCTCAATGAAAATCCACAGCACATTAGTGCTTTTCATGGAATAATGATGGCTGATTCACAAATGTCCAAGTTGGGTCTCAGAAATTGTAAGTCGGGATTTGAGAATCTAGGCTTTATAATTGATGATGGTGGTGGAACTGGAACTGTTGCAAAGATCATCTCTCAAGAATTTCCCAACTTGAAATGCACTGTACTTGACCCAGCAAAGGTTATAGCAGGCTTATCAGAAAGCAAAAATGTATGTTATATTGGTGGAGATATGTTTCAGTCCATCTCTCCTGCCGATGCAATTCTATTGAAGCATATGGAATCTTTTAATGAGGGAATGGCTTGTGATTCccaaatgattaaaattgcTCTTAAAGACTGCAATGGAGTTTTTAAGGGTCTTGACTCCATTGTTGATGTTGGAGGTGGCACAGGAAGCAGTAATTTGAGTTTTGTTGGTGGCAGCATGTTTGAATATATCCCTTCGGCTGATGCTGTTCTCTTGAAGATCTTGAAGAAATGCAAGGAAGCTATTTCAAGTGGAAGCAATGGAGGGAAGGTGATTGTGATAGATATAGTTATcaatgagaagaaagatgaTCACGCGGTGACTGAAGTGAAACTCCTTTTCAACATCAATATGATGGCTATCCTTAATGGAAAGGAGAGAAGTGAAAAGGAATGGGACAAACTCTTCTTCGATGCAGGATTCAAGAGTTACAAGATCACTTCTATATTTGGTTTTAGGTCCCTCATTGAAGCTTATTCTTA	1094	0.3857	MLQWILHDWNDEQCVQILKNCRGPITDECKRGKVIIIEMATDAKSDDCELAELKLFFELNMMAKYSGKERSEKECAKLFSEADIWHFFRSWFRDNSEANLFEFAYGKGFWEFLNENPQHISAFHGIMMADSQMSKLGLRNCKSGFENLGFIIDDGGGTGTVAKIISQEFPNLKCTVLDPAKVIAGLSESKNVCYIGGDMFQSISPADAILLKHMESFNEGMACDSQMIKIALKDCNGVFKGLDSIVDVGGGTGSSNLSFVGGSMFEYIPSADAVLLKILKKCKEAISSGSNGGKVIVIDIVINEKKDDHAVTEVKLLFNINMMAILNGKERSEKEWDKLFFDAGFKSYKITSIFGFRSLIEAYS	364

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva14g01450	364	PANTHER	FLAVONOID 4'-O-METHYLTRANSFERASE	213	254	-	-
	Bva14g01450	364	PANTHER	FLAVONOID 4'-O-METHYLTRANSFERASE	1	84	-	-
	Bva14g01450	364	PANTHER	FLAVONOID 4'-O-METHYLTRANSFERASE	255	363	-	-
	Bva14g01450	364	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	213	363	IPR029063	-
	Bva14g01450	364	PANTHER	O-METHYLTRANSFERASE	213	254	IPR016461	GO:0008168
	Bva14g01450	364	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	2	82	IPR029063	-
	Bva14g01450	364	Pfam	O-methyltransferase domain	256	346	IPR001077	GO:0008171
	Bva14g01450	364	Pfam	O-methyltransferase domain	85	213	IPR001077	GO:0008171
	Bva14g01450	364	Pfam	O-methyltransferase domain	1	82	IPR001077	GO:0008171
	Bva14g01450	364	PANTHER	FLAVONOID 4'-O-METHYLTRANSFERASE	84	213	-	-
	Bva14g01450	364	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	1	364	IPR016461	GO:0008168
	Bva14g01450	364	PANTHER	O-METHYLTRANSFERASE	84	213	IPR016461	GO:0008168
	Bva14g01450	364	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	83	213	IPR029063	-
	Bva14g01450	364	PANTHER	O-METHYLTRANSFERASE	1	84	IPR016461	GO:0008168
	Bva14g01450	364	PANTHER	O-METHYLTRANSFERASE	255	363	IPR016461	GO:0008168
	Bva14g01450	364	Gene3D	Vaccinia Virus protein VP39	214	254	IPR029063	-
	Bva14g01450	364	Gene3D	Vaccinia Virus protein VP39	84	213	IPR029063	-
	Bva14g01450	364	Gene3D	Vaccinia Virus protein VP39	1	83	IPR029063	-
	Bva14g01450	364	Gene3D	Vaccinia Virus protein VP39	255	364	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva14g01450	Bva-Chr14	7414534	7421483	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva14g01450	1	82	Monolignol Biosynthesis Gene Families	AT1G51990	44.048	1.31e-13	69.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva14g01450	-		K22588	pop:18103086	233.032