Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01411 ATGGCGCCGAGGGACAAGACTGCCGACGTTAAACCTGCCGGCAACGGCGGCGTCAAGGAGGTTCATTTTAGGGGAGTGAGGAAGAGACCGTGGGGGAGATACGCCGCCGAGATTAGAGATCCCGGGAAGAAGAGCCGGGTTTGGCTCGGAACCTTCGACACGGCCGAAGAGGCGGCCCGCGCCTACGACAAAGCCGCCAGGGAGTTTCGCGGTGCCAAGGCCAAAACGAACTTTCCTATGCCTTGTGAAAATGTGAACAAGAAGCTAGACAGCCAGAGCCCGAGCCAGAGTAGTACGGTGGAGTCGTCAAGCCGCGAGCCGGCTCTCATGGCTGAGTCGTCGCCGTTGGACCTCAACTTCGCCGTCACTAGTTCCGTTAAGTTTCCGTTCCAGAAGCAGCACCTGCAGCAGTTTCCCTCGCTCGGCGCGGTTTTTCCCGGTGCGGTGCCTGCCGTGAACCAGACGCTCTACTTCGACGCCGTACTGCGGCCCGGGATGGTAGCCCTCCATCCGTGCCAACAGTTCCAGTACGATCATCATCATATGAAGGCGAGTGAGTTCCACGCGACTGCCTCTGGAGGTAGAGCTCAGAGCGATTCCGATTCATCCTCGGTGATCGATCTGAACCAGGAGGACGTCATGCCTCGAAGAAACTTCATTATCGATCTTAACCTCCCTCCACAGGAAATCGctta 695 0.5784 MAPRDKTADVKPAGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDKAAREFRGAKAKTNFPMPCENVNKKLDSQSPSQSSTVESSSREPALMAESSPLDLNFAVTSSVKFPFQKQHLQQFPSLGAVFPGAVPAVNQTLYFDAVLRPGMVALHPCQQFQYDHHHMKASEFHATASGGRAQSDSDSSSVIDLNQEDVMPRRNFIIDLNLPPQEIA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01411 231 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Bva14g01411 231 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Bva14g01411 231 MobiDBLite consensus disorder prediction 86 108 - -
Bva14g01411 231 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Bva14g01411 231 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Bva14g01411 231 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
Bva14g01411 231 Coils Coil 55 75 - -
Bva14g01411 231 MobiDBLite consensus disorder prediction 76 108 - -
Bva14g01411 231 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Bva14g01411 231 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 220 - -
Bva14g01411 231 MobiDBLite consensus disorder prediction 1 21 - -
Bva14g01411 231 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE 1 220 - -
Bva14g01411 231 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Bva14g01411 231 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01411 Bva-Chr14 7038459 7039524 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01411 1 106 AP2-EREBP Transcription Factor Family AT5G44210 62.712 3.01e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva14g01411 AP2 8.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01411 K09286 - jre:108983254 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01411 14 7038459 7039524 Bva14g01411 14 7038459 7039524 ECH
Bva14g01411 14 7038459 7039524 Bva13g01161 13 5799304 5800383 ECH
Bva09g00887 09 4573901 4574990 Bva14g01411 14 7038459 7039524 ECH
Bva07g01728 07 16072171 16073170 Bva14g01411 14 7038459 7039524 ECH
Bva09g00647 09 3371725 3372621 Bva14g01411 14 7038459 7039524 ECH
Bva07g01989 07 17380565 17381455 Bva14g01411 14 7038459 7039524 ECH